Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0473 ATGATCCCTAACAACAATCTTTCTTCTTTCAAATCATCATCAGTTCAGCAATACGATCATGATCCTTCTTCTTCTAAGACGACTCTCATGATGATGAATAATGTCTTCTTCGCTTCAAGCTCTACTTCAAACCCTAACTACGACACTACGTCTTCGCTTGAGCAGTCTCTGAGTAACTCCAGTGGCACGGTGTTTTCCGGCGAGCATGAAGATGCGACGAAACCAGGTGGTGATATGGCTAAAAATAATGTTAGTAACGCGGAATCTGAATCTGTGTTGCGTGAGGTGAACGCTCTACCTAGATGGAGGAATTACCGAGGCGTGAGGCGTCGGCCGTGGGGCAAGTTTGCTGCCGAGATCCGGGACCCAAAGAGGAACGGCGCGAGAACTTGGTTAGGGACATATGAGACGGAAGAAGATGCAGCTTTGGCTTATGATAGAGCTGCTTTTAAGATAAGGGGAAGAAAGGCCAAGCTCAATTTTCCACACCTCATTGGGTCGGAATCAGAACTGCCGCCACCGGAGCCGGTTGACAAAAAGCGGTGCCACTCACAAGAACCTTCATCTTCGTCAGGGTGCGCATCTGAGGATGGTGGATCTCAAGGGTCAAGTAAGAAGAAGAGCATCACTAGCCTATTGAATAAGTTAGCAACAAATAGAAGACAAGCTGGAAGCTTGAAATAA 684 0.4708 MIPNNNLSSFKSSSVQQYDHDPSSSKTTLMMMNNVFFASSSTSNPNYDTTSSLEQSLSNSSGTVFSGEHEDATKPGGDMAKNNVSNAESESVLREVNALPRWRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYETEEDAALAYDRAAFKIRGRKAKLNFPHLIGSESELPPPEPVDKKRCHSQEPSSSSGCASEDGGSQGSSKKKSITSLLNKLATNRRQAGSLK 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0473 227 FunFam Ethylene-responsive transcription factor 2 103 163 - -
Lele39g0473 227 PANTHER DNA-BINDING DOMAIN 52 206 IPR044808 GO:0003700|GO:0009873
Lele39g0473 227 SUPERFAMILY DNA-binding domain 104 163 IPR016177 GO:0003677
Lele39g0473 227 MobiDBLite consensus disorder prediction 41 67 - -
Lele39g0473 227 Pfam AP2 domain 104 154 IPR001471 GO:0003700|GO:0006355
Lele39g0473 227 Gene3D AP2/ERF domain 103 163 IPR036955 GO:0003700|GO:0006355
Lele39g0473 227 CDD AP2 104 164 IPR001471 GO:0003700|GO:0006355
Lele39g0473 227 MobiDBLite consensus disorder prediction 165 227 - -
Lele39g0473 227 MobiDBLite consensus disorder prediction 41 91 - -
Lele39g0473 227 PRINTS Ethylene responsive element binding protein signature 144 164 IPR001471 GO:0003700|GO:0006355
Lele39g0473 227 PRINTS Ethylene responsive element binding protein signature 105 116 IPR001471 GO:0003700|GO:0006355
Lele39g0473 227 SMART rav1_2 104 168 IPR001471 GO:0003700|GO:0006355
Lele39g0473 227 MobiDBLite consensus disorder prediction 1 26 - -
Lele39g0473 227 MobiDBLite consensus disorder prediction 186 227 - -
Lele39g0473 227 ProSiteProfiles AP2/ERF domain profile. 104 162 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0473 Lele-ChrLele39 3796004 3796687 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0473 105 196 AP2-EREBP Transcription Factor Family AT2G44840 72.043 8.40e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele39g0473 AP2 1.5e-13 CL0081