Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0472 ATGATGAACCCTGATTTTGAATCAATTCAACAGTACCTGATTGAAGAAGATCCTTCCTCCATGACTCTCTTGAATGGCTTCTTCATCACGGACAACCCCACTTCGAACCTCAACTATGTTATTGACACCGCTTTGCCGGAGCAGGGTGTTAGTAACTCCGGCGGTATGGTGTTTTCCGGTGGGAATGACGACAAGTACGCTATGAATCCAGGTGGTTGTTATGGCGATAGGCTTAATCGTGGTAATAACAACACAGGATCTGTGGTGGAGTGTGAAAAGAACGCGCCACCTAGATGGAGGAATTACCGAGGTGTGAGGCGGCGGCCATGGGGGAAGTTCGCTGCTGAAATTCGGGACCCAAAGAGGAATGGCGCGAGGACATGGCTGGGAACCTATGAGACGGAGGAGGATGCAGCTTTGGCTTATGATAGAGCTGCTTTCAAGATGAAAGGTAGAAAAGCTAAGCTCAATTTTCCACACCTCATTGGATCGGAACCACTGCCGGAGCTGGCAAGAGTAGTTGCCGGAAAGAAGCGGCGCCGCCCTCTGGAAGAAAAGCCCCCAGGTCTACCAAATAAGATAGAAATGGTGTGA 594 0.4983 MMNPDFESIQQYLIEEDPSSMTLLNGFFITDNPTSNLNYVIDTALPEQGVSNSGGMVFSGGNDDKYAMNPGGCYGDRLNRGNNNTGSVVECEKNAPPRWRNYRGVRRRPWGKFAAEIRDPKRNGARTWLGTYETEEDAALAYDRAAFKMKGRKAKLNFPHLIGSEPLPELARVVAGKKRRRPLEEKPPGLPNKIEMV 197
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0472 197 Gene3D AP2/ERF domain 100 160 IPR036955 GO:0003700|GO:0006355
Lele39g0472 197 ProSiteProfiles AP2/ERF domain profile. 101 159 IPR001471 GO:0003700|GO:0006355
Lele39g0472 197 CDD AP2 101 161 IPR001471 GO:0003700|GO:0006355
Lele39g0472 197 MobiDBLite consensus disorder prediction 177 197 - -
Lele39g0472 197 FunFam Ethylene-responsive transcription factor 2 100 160 - -
Lele39g0472 197 PANTHER DNA-BINDING DOMAIN 87 169 IPR044808 GO:0003700|GO:0009873
Lele39g0472 197 PRINTS Ethylene responsive element binding protein signature 102 113 IPR001471 GO:0003700|GO:0006355
Lele39g0472 197 PRINTS Ethylene responsive element binding protein signature 141 161 IPR001471 GO:0003700|GO:0006355
Lele39g0472 197 SUPERFAMILY DNA-binding domain 101 160 IPR016177 GO:0003677
Lele39g0472 197 Pfam AP2 domain 101 151 IPR001471 GO:0003700|GO:0006355
Lele39g0472 197 SMART rav1_2 101 165 IPR001471 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele39g0472 Lele-ChrLele39 3787501 3788094 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0472 101 164 AP2-EREBP Transcription Factor Family AT2G44840 85.938 7.46e-36 123
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele39g0472 AP2 1.2e-13 CL0081