Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0466 ATGATGAGAATGCGGCAGCAAATAGCCAAACAGCAGGCATATGAACATAAACTCAGTGAAAGCAATCACAAGAGAAAGATGGAAGAAGAGAAATCATTTGCACTTGATGCTGTTATGAAGGAAGCTGTTGATCTGGAGAATATTCCTATTGAGGAAGTGTTTCAACATCTCAAATGCTCAAAGGAAGGTTTGAGCTCTGAGGAAGCAAAGCAAAGGCTGGACATGTTTGGATATAACAAGCTAGAAGAGAAGAAAGAAAGTAAAATACTGAAATTTTTGGGGTTCATGTGGAATCCATTGTCTTGGGTGATGGAAGCTGCTGCTCTTATGGCCATTGCTATGGCCCATGGAGGGGGTGAGCCAGGAGATTATCCAGATTTTGGTGGCATAGTCTTGTTGCTTCTCATAAATTCTACCATAAGCTTCATAGAAGAAAACAATGCTGGAAATGCTGCTGCTGCACTTATGGCTCGTTTGGCTCCAAAAGCTAAGGTACTACGTGATGGAAAATGGAGTGAAGAAGATGCTTCAGTGTTGGTTCCTGGAGACGTAATTAGCATCAAGCTTGGTGACATCATTCCTGCAGATGCTCGTCTCCTTCAAGGAGATCCTTTGAAGATTGACCAATCTGCTCTGACTGGAGAGTCACTTCCAGTGACAAAAAATCCTGGAGATGGTGTATATTCTGGCTCAACTTGCAAGCAAGGAGAAATTGAAGCTCTAGTTATTGCCACTGGGGTCCACACTTTCTTTGGCAAAGCAGCTCATCTTGTGGAAAATACCACACACATAGGACACTTCCAGAAGGTTCTTATCCAGAAACTGAATGTTGTTTTATATAGTTCATCATGA 852 0.4214 MMRMRQQIAKQQAYEHKLSESNHKRKMEEEKSFALDAVMKEAVDLENIPIEEVFQHLKCSKEGLSSEEAKQRLDMFGYNKLEEKKESKILKFLGFMWNPLSWVMEAAALMAIAMAHGGGEPGDYPDFGGIVLLLLINSTISFIEENNAGNAAAALMARLAPKAKVLRDGKWSEEDASVLVPGDVISIKLGDIIPADARLLQGDPLKIDQSALTGESLPVTKNPGDGVYSGSTCKQGEIEALVIATGVHTFFGKAAHLVENTTHIGHFQKVLIQKLNVVLYSSS 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0466 283 Pfam Cation transporter/ATPase, N-terminus 47 110 IPR004014 -
Lele39g0466 283 PANTHER CALCIUM-TRANSPORTING ATPASE 42 276 - -
Lele39g0466 283 Gene3D - 161 245 - -
Lele39g0466 283 SUPERFAMILY Calcium ATPase, transduction domain A 161 258 IPR008250 -
Lele39g0466 283 Gene3D - 123 271 - -
Lele39g0466 283 SMART Cation_ATPase_N_a_2 44 116 IPR004014 -
Lele39g0466 283 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 130 255 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0466 283 FunFam Plasma membrane ATPase 161 245 - -
Lele39g0466 283 SUPERFAMILY Calcium ATPase, transmembrane domain M 44 271 IPR023298 -
Lele39g0466 283 MobiDBLite consensus disorder prediction 1 26 - -
Lele39g0466 283 Pfam E1-E2 ATPase 159 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0466 Lele-ChrLele39 3753734 3756749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0466 34 281 Primary Pumps ATPases AT3G60330 80.645 6.40e-132 395