Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0465 ATGTTTCAGGTTCTGACATCCATTGGGAACTTCTGCATTTGTTCGATCGCGGCTGGGATGCTTATCGAGATGATCGTGATATGGGGGGTTCAAAAGAGAAGTTACCGAATTGGAATCGATAACCTCCTAGTGCTTCTCATTGGTGGCATCCCAATTGCAATGCCAACTGTTCTTTCTGTTACAATGGCTATTGGTTCACATAAATTGTCTCAGCAGGGTGCCATAACAAAGAGAATGACTGCCATTGAAGAAATGGCTGGCATGGATGTGCTATGCAGTGACAAAACAGGCACACTAACTCTTAACAAGCTTTCTGTGGACAAAAATTTGATTGAGGTTTTTCCCAGAGATGTTGACAAGGACATGGTTGTACTTATGGCTGCTAGAGCATCAAGAACAGAGAATCAAGATGCGATTGATGGTGCAATTGTTGCCATGTTATCAGATCCAAAAGAGGCAAGAGCTGGTATAACAGAAGTTCATTTCCTTCCATTCAATCCAAATGATAAAAGAACTGCACTTACATATGTTGATGCTGATGGTAAGATGCATAGAGTTAGTAAAGGTGCACCAGAACAGATTCTCAGTCTTTCACGTAACAAAGCAGAAATTTCACAGAGGGTTCATACCATTATTGACAAGTTTGCAGAACGTGGACTACGGTCTCTTGCAGTAGCCCGGCAGGAAGTACCTGAAGGAACTAAAGAAAGTGCAGGAAGCCCCTGGGAATTTGTTGGCCTTCTTCCACTTTTCGATCCTCCTCGCCATGATAGTGGAGAAACAATCAAAAGAGCTCTGGATCTTGGTGTGAGTGTCAAAATGATAACGGGAGATCAACTTGCAATTGCTAAGGAAACAGGAAGGCGTCTAGGAATGGGTACTAACATGTATCCTTCTTCATCTCTTCTGGGTGAACACAAAGGTGAAACACTTGAGTCTCTCCCAATTGATGAGCTCATTGAGAATGCTGATGGATTTGCTGGTGTCTTTCCTGAACACAAGTATGAGATTGTGAAGAGGTTACAAGCTAGAAAACACATTTGTGGGATGACTGGTGATGGTGTAAATGACGCTCCCGCCTTGAAGATAGCCGACATAGGTATCGCCGTAGCAGATTCCACCGACGCTGCTCGAAGCGCATCCGACATAGTTCTAACAGAACCTGGATTGAGTGTGATCATAAGTGCTGTTTTAACTAGCCGTGCTATATTCCAAAGGATGAAAAACTACACGATATATGCTGTATCTATAACTATACGTATTGTGCTGGGCTTTATGTTAGTGACCTGCTTTTGGAAATTTGACTTCCCTCCCTTCATGGTTCTTATAATTGCCGTTCTCAATGATGGTACGATCATGACAATATCTAAAGATAGAGTTAAGCCTTCTCCAGCACCTGATAGTTGGAAGCTCAGTGAAATTTTTGCAACTGGGATTGTCCTTGGAAGCTATCTGGCTATAATGACTGTGATATTCTTCTGGGCGGCTTATGAAACTGACTTTTTCCACAACCATTTTCATGTGGAAAACTTCAATTCAAACCTTTATGACATGGCAAATAAAGATATCGCCGAGGCACTAAATGAGAAGATGGGATCTGCAGTGTATCTTCAAGTCAGCATCATCAGTCAAGCATTAATCTTTGTAACTCGCTCTCATGGATGGTCTTACACCGAACGACCTGGTCTTTTGCTCGTTATTGCTTTCATTATTGCTCAGCTGGTTGCAACGGTTTTATCTGCCACTGTGTCCTGGCATACTGCTGGAATAAGAAGCATAGGTTGGAAGTGGACTGGAGTCATTTGGCTATACAACATTGTAACTTATGTATTGTTGGATCCTATAAAATTTGCTGTCCGTTATGCATTAAGTGGAAGGGCATGGAATTTGGTCGTAAATCAAAGAACTGCATTCACAAACAAAAATGACTTTGGAAGAGAAGCTCGTGAGGCTGCATGGGCTGCTGAGCAGAGAACCTTGCATGGCCTTCAGTCTGCTACTGATTCAAAGATATTTGCAGATAAGCACACATTCAGGGAAATCAACACATTAGCAGAAGAGGCTAAGAGAAGAGCTGAAATAGCAAGGATGAGAGAGCTTCACACTTTGAAAGGAAGAGTGGAATCATTTGCCAAGTTAAGGGGTTTGGACGTTGAAAATATTAATGGGCACTACACTGTCTAA 2184 0.4226 MFQVLTSIGNFCICSIAAGMLIEMIVIWGVQKRSYRIGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFPRDVDKDMVVLMAARASRTENQDAIDGAIVAMLSDPKEARAGITEVHFLPFNPNDKRTALTYVDADGKMHRVSKGAPEQILSLSRNKAEISQRVHTIIDKFAERGLRSLAVARQEVPEGTKESAGSPWEFVGLLPLFDPPRHDSGETIKRALDLGVSVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGEHKGETLESLPIDELIENADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKIADIGIAVADSTDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVTCFWKFDFPPFMVLIIAVLNDGTIMTISKDRVKPSPAPDSWKLSEIFATGIVLGSYLAIMTVIFFWAAYETDFFHNHFHVENFNSNLYDMANKDIAEALNEKMGSAVYLQVSIISQALIFVTRSHGWSYTERPGLLLVIAFIIAQLVATVLSATVSWHTAGIRSIGWKWTGVIWLYNIVTYVLLDPIKFAVRYALSGRAWNLVVNQRTAFTNKNDFGREAREAAWAAEQRTLHGLQSATDSKIFADKHTFREINTLAEEAKRRAEIARMRELHTLKGRVESFAKLRGLDVENINGHYTV 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0465 727 SFLD C1.7: P-type atpase like 74 403 - -
Lele39g0465 727 PANTHER CALCIUM-TRANSPORTING ATPASE 3 659 - -
Lele39g0465 727 SUPERFAMILY Calcium ATPase, transmembrane domain M 4 623 IPR023298 -
Lele39g0465 727 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 17 299 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0465 727 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 326 430 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0465 727 PRINTS H+-transporting ATPase (proton pump) signature 208 226 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0465 727 PRINTS H+-transporting ATPase (proton pump) signature 323 339 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0465 727 PRINTS H+-transporting ATPase (proton pump) signature 382 407 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0465 727 PRINTS H+-transporting ATPase (proton pump) signature 536 557 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0465 727 PRINTS H+-transporting ATPase (proton pump) signature 351 367 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele39g0465 727 Gene3D - 3 590 - -
Lele39g0465 727 SFLD p-type atpase 74 403 IPR044492 -
Lele39g0465 727 Pfam haloacid dehalogenase-like hydrolase 88 365 - -
Lele39g0465 727 Gene3D - 104 251 IPR023299 GO:0000166
Lele39g0465 727 PRINTS P-type cation-transporting ATPase superfamily signature 92 106 - -
Lele39g0465 727 PRINTS P-type cation-transporting ATPase superfamily signature 351 370 - -
Lele39g0465 727 PRINTS P-type cation-transporting ATPase superfamily signature 268 278 - -
Lele39g0465 727 PRINTS P-type cation-transporting ATPase superfamily signature 246 257 - -
Lele39g0465 727 PRINTS P-type cation-transporting ATPase superfamily signature 374 386 - -
Lele39g0465 727 Gene3D - 89 388 IPR023214 -
Lele39g0465 727 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 3 581 IPR006534 GO:0008553|GO:0016020|GO:0120029
Lele39g0465 727 FunFam ATPase 4 plasma membrane-type 335 591 - -
Lele39g0465 727 SUPERFAMILY HAD-like 88 398 IPR036412 -
Lele39g0465 727 ProSitePatterns E1-E2 ATPases phosphorylation site. 94 100 IPR018303 -
Lele39g0465 727 FunFam Plasma membrane ATPase 104 251 - -
Lele39g0465 727 Gene3D - 676 727 - -
Lele39g0465 727 FunFam Plasma membrane ATPase 244 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0465 Lele-ChrLele39 3747864 3753674 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0465 3 727 Primary Pumps ATPases AT5G62670 78.345 0.0 1174