Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0463 ATGTCTTCTTCTTCACCTCCTCCTCCTCTTTCACCATCATCAAGCGCCATTAATCCTTCATCATCATCATCAAACGAGCAAGAACGTCATTACGACGTCTTCTTTACTTACAAAACTAAATGTGAAACCATAGTTTCTCTCGAAACCTCTTTAACGGATGCTTCAATCAGAACATACATGGACCACGATGAGCCAATCTCGTCAACCTTGAAGAAAGCCATAGAACTGTCAAGAATAGTTATCTTCATCTTCACTAAACACTTCGCTTCTTCTGAAGATTTCTTGAATAAACTCGACATAATCATAAATTGTCACAAAGATATGGGTAAGAAAGTGTTGCCTATATTGTGTGGTGTGAGTCTCACTGATATACGTCAGGAGATTGGTAGTATTGCAGAATTAATGAGTAGAGGAGATTTGCAGAAACAAGAGTTTTTCAGATGGAGAAGTGCCTTTACTGAAGCTACTTCGCTTTCCAGATGTACAATCTCAACCAAGTGTTCCAGATACGACAGAAGAATCAGAGATATCACTCACTCCATTAAGATATTTCTTGATGCTACATACTTGGATCTTCCATCACATCTGGTACCAATACAACGTCGGGTGAAAGAAGTGCTTCATTTGTCCAAATACTACTCAAATGATATCGCTAAAATGGACAAAAGGGAATCTCTTGAGCTTCTAAGCTGGCATGCTTTCAAGTTGAGTTGGGATGCTTTCAAGCAAAATAGTCCAAGCAACGATTTCATTAATCTTGCAAAAAGTGTCATTTTGCATTGTGAAGGATTACCACTAGTTGTTGAAGTTATTGGCTCTCTTTTGTATAGGATGACAGCACAAGAGTGGGAATGTGTTTTGAAGAAACTGAAAACCATTCCTGCAAGTCAAATACAAGAGAAGATGAAAATAAGTTGTGAGTATTTAGATGACTCGGTGAAAGATTTATTCTTTAATATTGCATACTTTTATGTGGATAATGAGAAACTGTCTGTTACACAAAACCTAAGTGACGGTGGCTTTCAATTTCCTGTTGAGATTGGAATAAAAACGCTTGTTGAGCGGAGCCTGATAAGAGTTGACATGAATAATAGGGTTCATATGCATGAATTGCTTCAAGAGATTGGAAAGGGAATAAACCCTAATAAGCCAAAACTAAAATATAACTATCATGTGTTCTTGAGTTTCTGTGGTGAAGACACACGCAGGGGTTTTGCAACTCATCTTCGCAATGCATTGAAAGGGGCAGCTGAGTTGATTAACCGTGTTATTGACACTGTTACCAAGAACCTAGATGACAAAACAAATTTGTTGGTCACACATCATCCTGTGGGGCTGAGGTCTCGCATGAAGGAAATCATCCAAATGTTAAGTGACCAATCATCAGATAAGGAGCTTCAGAGCTAG 1407 0.3838 MSSSSPPPPLSPSSSAINPSSSSSNEQERHYDVFFTYKTKCETIVSLETSLTDASIRTYMDHDEPISSTLKKAIELSRIVIFIFTKHFASSEDFLNKLDIIINCHKDMGKKVLPILCGVSLTDIRQEIGSIAELMSRGDLQKQEFFRWRSAFTEATSLSRCTISTKCSRYDRRIRDITHSIKIFLDATYLDLPSHLVPIQRRVKEVLHLSKYYSNDIAKMDKRESLELLSWHAFKLSWDAFKQNSPSNDFINLAKSVILHCEGLPLVVEVIGSLLYRMTAQEWECVLKKLKTIPASQIQEKMKISCEYLDDSVKDLFFNIAYFYVDNEKLSVTQNLSDGGFQFPVEIGIKTLVERSLIRVDMNNRVHMHELLQEIGKGINPNKPKLKYNYHVFLSFCGEDTRRGFATHLRNALKGAAELINRVIDTVTKNLDDKTNLLVTHHPVGLRSRMKEIIQMLSDQSSDKELQS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0463 468 SUPERFAMILY Toll/Interleukin receptor TIR domain 386 415 IPR035897 -
Lele39g0463 468 Pfam NB-ARC domain 219 309 IPR002182 GO:0043531
Lele39g0463 468 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 157 IPR035897 -
Lele39g0463 468 Gene3D - 219 310 IPR042197 -
Lele39g0463 468 ProSiteProfiles TIR domain profile. 29 192 IPR000157 GO:0007165
Lele39g0463 468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 318 IPR027417 -
Lele39g0463 468 Pfam TIR domain 31 179 IPR000157 GO:0007165
Lele39g0463 468 Gene3D - 384 441 IPR035897 -
Lele39g0463 468 Gene3D - 23 186 IPR035897 -
Lele39g0463 468 MobiDBLite consensus disorder prediction 1 25 - -
Lele39g0463 468 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 202 383 IPR044974 GO:0006952
Lele39g0463 468 SMART till_3 30 158 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0463 Lele-ChrLele39 3728766 3732956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0463 193 379 WRKY Transcription Factor Family AT5G45050 30.688 9.27e-14 72.0