Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0457 ATGTCTTCTTTCGCTTCTTCATCCTCTAATTGGGAATCCACTTTTGAGTACCACGTCTTCTTAACCATCTGCCATCCCAAACACGAATTGAGAACCAACTTGGAAGAAAACTTGAGAGATGTTGGAATCCAAGCTTTGATTGATGATCAGATGGATGCGTTTCCCGTGCACGACATAGTATTGTGCAGAATGGTTGTGATTGTTTTCGCACCAGGATTCCTTGATTTCGACATATTTCTGCAGAGACTTATGAATATAAGGCGATGTCAAAAACATATGAATAAACAAGTGTTGACTGTATTCCGTGGATTGAGCGAGCAGCAAGTACATGAGCAGTTGCAGGGTGTGGATCAGAGAAGATTAGATGCTCTGGATTTCGATTTCGATTTGGACTCAGGAGGATTCATCGTTGAAGCTGCTTCGCTCTTGGATTCAGCAACAGCCATCGCGGAAGAAGCTTCGTTATCTGATTTGGGATCTGACTATTGGAGGCAATTAAGATCTGACTATTGGAGGCAATTAAGATCTTATCGTGAACCTATGAAGCATATTATTTTAGATATTTGTCAAACTGAACTTGAAGAGACAGATGATGGTGCTGTGACGCTAGAACAAATGAAGCAGGACCTCCGTAGAAAAAGGGTCTTAGTAGTACTTGATGATGAATATCTACTACTCGAGGAATGGCGCGAAATTGTGAAATGGTGTGGTCAAGGGAGCTTGATATTCATTACAGCAAAACACAAGACTATCTTTGATGACTCTATTGGCATATCATATGAAATGGAAAGGTTAAGCAGTGAGGAATCTCTTGCGCTTTTTTGCTTGCATGCATTTAAGACATTTACTCCAACAAATGATTTTGAGGGTTTTTCGGAGCGAGTCAGTGAATACTGTGAAGGACTACCGTTGGCTCTTGAAGTTTTTGGCTCTCTTTTGCATAATAGGACAAAAATAGAGTGGCGAACAATAATGAAAAACATGGCAGGAATTCCTCATGGTCCAATACAAGAGAAGCTCAAAATCAGCTGTAACTTATTAACTGACATAGAGAAAGATTTATTTTTTAATATAGCTTCTTTTTATCTGGGTCAGGATAAGCACTATGTCACACAATTGCTAAATAGCTCAAGATTTCCTGTGGAAATGGGAATGTCGAAACTCATTGAGCGTAACCTTGTAAAGGTCATGAACGACAAGCTTTATGTTCATGATTTGCTGCAAGGGATAGCAATGGAAATCAGTCCAAGCAAGCAGATCCTTGGGGTAGATCAAGTCTACACCGTGAAAGAATTAGATGCCGAAGAATCTCTTGAACTTTTTAGTTGGCATGCATTTAAACAGGAATTCCCTGAACAAGATTTCATTGAACTTTCAAGAAGGGTAGTCTGTTACTCTGGATGTTTGCCGCTAGCTCTTGAAATCCTTGGTTCCTGTTTATTTGACAGAGACATATCGACTTGGAAAAGAGTGTTGAAGAAATTACAACAAATTCCAAACGATCAAATCCAGGAGAAGCTTAAAATAAGCTATGATGATTTGAATGGTATCTCCAATAAAGATCAAACTCTTTTCGTTACCACTTTAATTTCAAGGTTCCTGCTCCAACAGCAGTCTGGCCACCAGGTAGGTGATGGATTTGCTAGTGGGATAATCAATCTGGGTGAGATACAAGTGGCTCAGATTTCCACATAA 1695 0.3965 MSSFASSSSNWESTFEYHVFLTICHPKHELRTNLEENLRDVGIQALIDDQMDAFPVHDIVLCRMVVIVFAPGFLDFDIFLQRLMNIRRCQKHMNKQVLTVFRGLSEQQVHEQLQGVDQRRLDALDFDFDLDSGGFIVEAASLLDSATAIAEEASLSDLGSDYWRQLRSDYWRQLRSYREPMKHIILDICQTELEETDDGAVTLEQMKQDLRRKRVLVVLDDEYLLLEEWREIVKWCGQGSLIFITAKHKTIFDDSIGISYEMERLSSEESLALFCLHAFKTFTPTNDFEGFSERVSEYCEGLPLALEVFGSLLHNRTKIEWRTIMKNMAGIPHGPIQEKLKISCNLLTDIEKDLFFNIASFYLGQDKHYVTQLLNSSRFPVEMGMSKLIERNLVKVMNDKLYVHDLLQGIAMEISPSKQILGVDQVYTVKELDAEESLELFSWHAFKQEFPEQDFIELSRRVVCYSGCLPLALEILGSCLFDRDISTWKRVLKKLQQIPNDQIQEKLKISYDDLNGISNKDQTLFVTTLISRFLLQQQSGHQVGDGFASGIINLGEIQVAQIST 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0457 564 Coils Coil 193 213 - -
Lele39g0457 564 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 113 IPR035897 -
Lele39g0457 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 422 515 IPR027417 -
Lele39g0457 564 Pfam NB-ARC domain 182 330 IPR002182 GO:0043531
Lele39g0457 564 Pfam NB-ARC domain 424 511 IPR002182 GO:0043531
Lele39g0457 564 Gene3D - 11 129 IPR035897 -
Lele39g0457 564 PRINTS Disease resistance protein signature 299 313 - -
Lele39g0457 564 PRINTS Disease resistance protein signature 209 223 - -
Lele39g0457 564 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 419 526 IPR044974 GO:0006952
Lele39g0457 564 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 356 IPR027417 -
Lele39g0457 564 Gene3D - 264 347 IPR042197 -
Lele39g0457 564 Gene3D - 431 515 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0457 Lele-ChrLele39 3644568 3652073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0457 423 526 WRKY Transcription Factor Family AT5G45050 31.429 3.91e-07 51.2