Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0453 ATGGCAGTGGATTCGTCTCTCGAGGGTTTCACACTTGATCCTGCTAAATGCAGTAAGTTGAGTATGGAGGAAAAAAGAGAACTTGTATATGAAATATCTAAGTGGCCAAATGATGCATTGGAAATGCTACAGTCATGGAGCCGTCAAGAGATTTTACAAATCCTTTGTGCTGAGATGGGGAAAGAGAGGAAGTATACTGGATTAACAAAGGTGAAAATTATAGAAAACCTTCTGAAAATTGTTTCTGAAAAGAAATCTGGAGGTCAGGAAATTGCAACAGACATTGAACCACATTCTTCTGCTTCATATGGCCAGAAACCTGCTAAAAGGCAGAGAAAAAATGAGAATCCATCTCGAATACCTCTTCCAGTAAATGATGTTTCTGTCAGCAACGTGGTTGGAGATGTAAGAAGTATTTCGTACTGCAAAAACACAGCTTGCAAAGCTACCCTAAGTGAAGCAGATATGTTTTGTAAACGATGCTCATGCTGCATTTGTCATAAATATGATGACAACAAAGATCCTAGCCTTTGGTTGATATGTGGCTCTGAGCCTCCATTTCCTGGTGTTTCTTGTGGCTTGTCTTGTCATCTTGAATGTGCTTTAAAGCATGATAATTCTGGCATTTCCAAATATGGAAAACGTCCCAAGCTTGATGGAAGCTTCTACTGCATCTCATGTGGGAAAGTGAATGATTTGCTCGGATGCTGGAGAAAGCAACTGATGGTGGCTAAAGATACTAGACGTGTTGACATACTATGCTACCGTGTTTCCTTGAGCCAAAGAATTTTACAAGGGACTGAGAAGTATAAAAAGCTTTATGAAATTGTTAATGAGGCGGTGAAGAAACTTGAACCTGAATTAGGCCCACTAACCGGTTCCCCAGTGAAGATTGGTAGGGGCATTGTGAACAGACTTTCATCAGGTCCAGAGGTTCAGAAACTCTGTGGTTTGGCTCTCGAATCATTAGATTCTTTTGTTTCTAAAAGGATTATGCCTCCATCACCTAATCCAACAATTCAAGATGCAAATTTGATTGCTACAAATATGGTGAGATTCGAAGATGTTAGAGATACATCGCTGACTGTGATTTTGGGTTCTGAAGATCCTTCTGAAGAAAACATCAGTGGCTATTCCCTGTGGCATCGCAAGGCTCTCGATGTGGAATATCCAGTTGAACCAACCTGCACTTTGGTTCTACCTGGCAGAAGTTTCAATGTAAGGAGTCTGATTCCAGTTACAAAATATAGTTTCAAAGTTGTTTCCTATAGTGGCACAAGGGAGATGTGTACTTGTGAAGTTCAAATCTCAACAGAGCCCGGCGAGTATGAAGTTCCTAACTGTTCGGCAACAGAGAGAAGTCAGAGCCCAGTAACCAACTGTAGCAGCCATTCCAATCCGTCGTCCGTGGAAGATGAAACTAATAACAGTAATCCATTTAGTGACCAGACCGATGATCGAGCAGATAATTATCTTACTTATCACAAGGATGATGACAAGCTTGCTTCTGAAAATTTATCCAATGATGTTATCAAGTGTTCTAACACTGTTGGAGGGGGACCGCCTGCTGATGCAGATTCTTTGTCAGAAAAGCAACATGCTCGAGGCTTGGCTGTAAACATACCTGGTTCTGAAATTCTAAGGCTTGAAAATAACCATTCGCCAGAGGGACAAATCACCGAGGACTTGAGCACTGACGATGGGTTGAATTCCCCTGTTCAGATGGGGAGGGAATGTGTGCCACTCGTACGTAGCTCGGAAGCAAGCTTGCCTATTACTCCTTGCAAGTTGGAAATACTTAAGGATGGGCCGGGAAGAACTGGGAGATCTAAGTCCATGGGCAAGGATCAAGAAAATGGCTCTGGGAAGAGAGAGGGCCCTCAAGATGGAAGCACTTCTAAGAAGAGAGGAGCTGAACCAAGGCAAGATGAGGGTTGTGTTGCCAACAGGTATTCGGATCGGGATTTTGAGTATTACGTGAAAGTGATCAGATGGCTTGAGTGTGAAGGGCACATAGAAAAGAACTTCAGACAGAAATTTTTGACTTGGTATAGCTTGAGAGCAACACCACAGGAAGTAAAGATTGTGAAAGTATATATTGATACATTTCTGGAAGATCCACCTTCTCTTGCAGAGCAGCTTGTGGACACCTTCTCAGAATGCATATCAAACAAGAAGAAACCATCTGTTGTGCCAGCTGGGTTCTGCATGAAGCTCTGGCATTGA 2226 0.4236 MAVDSSLEGFTLDPAKCSKLSMEEKRELVYEISKWPNDALEMLQSWSRQEILQILCAEMGKERKYTGLTKVKIIENLLKIVSEKKSGGQEIATDIEPHSSASYGQKPAKRQRKNENPSRIPLPVNDVSVSNVVGDVRSISYCKNTACKATLSEADMFCKRCSCCICHKYDDNKDPSLWLICGSEPPFPGVSCGLSCHLECALKHDNSGISKYGKRPKLDGSFYCISCGKVNDLLGCWRKQLMVAKDTRRVDILCYRVSLSQRILQGTEKYKKLYEIVNEAVKKLEPELGPLTGSPVKIGRGIVNRLSSGPEVQKLCGLALESLDSFVSKRIMPPSPNPTIQDANLIATNMVRFEDVRDTSLTVILGSEDPSEENISGYSLWHRKALDVEYPVEPTCTLVLPGRSFNVRSLIPVTKYSFKVVSYSGTREMCTCEVQISTEPGEYEVPNCSATERSQSPVTNCSSHSNPSSVEDETNNSNPFSDQTDDRADNYLTYHKDDDKLASENLSNDVIKCSNTVGGGPPADADSLSEKQHARGLAVNIPGSEILRLENNHSPEGQITEDLSTDDGLNSPVQMGRECVPLVRSSEASLPITPCKLEILKDGPGRTGRSKSMGKDQENGSGKREGPQDGSTSKKRGAEPRQDEGCVANRYSDRDFEYYVKVIRWLECEGHIEKNFRQKFLTWYSLRATPQEVKIVKVYIDTFLEDPPSLAEQLVDTFSECISNKKKPSVVPAGFCMKLWH 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0453 741 MobiDBLite consensus disorder prediction 602 646 - -
Lele39g0453 741 MobiDBLite consensus disorder prediction 93 107 - -
Lele39g0453 741 MobiDBLite consensus disorder prediction 443 487 - -
Lele39g0453 741 Pfam PHD - plant homeodomain finger protein 142 261 IPR032881 -
Lele39g0453 741 MobiDBLite consensus disorder prediction 598 646 - -
Lele39g0453 741 SUPERFAMILY Fibronectin type III 351 425 IPR036116 GO:0005515
Lele39g0453 741 CDD PHD_VIN3_plant 162 227 - -
Lele39g0453 741 PANTHER VIN3-LIKE PROTEIN 2-RELATED 10 741 IPR044514 GO:0010048|GO:0040029
Lele39g0453 741 MobiDBLite consensus disorder prediction 89 121 - -
Lele39g0453 741 CDD FN3 351 425 IPR003961 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0453 Lele-ChrLele39 3580150 3584671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0453 3 476 PHD Gene Family AT4G30200 54.832 6.99e-164 485