Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0441 ATGGATAGGACTGAATTAGAAAGCCTCGAGAAAGGATGTTACGGTAGAAAGGTACTTCTTGTGCTTGATGATGTGAATGGAGAGCAACTACATGCTTTACGTGGAATTCTTCAATTCGTTGGTAACGGGAGTAGAATAATCATTACAACTAGAGACTTACATCTACTGATGAACTTTCAAGTGGATGGAGTATATACCATGAAACCTTTGCGCGATCATGAGTCACTTGAACTTTTCTGTAGAATAGCATTCAAACAAGAAAGTCCTGAAGGAGAATTCATGGAACTTAGCAGAAGAGTGGTTGCTTATACTGAGGGACTCCCACTAGCTCTTAAAGTATGA 342 0.3947 MDRTELESLEKGCYGRKVLLVLDDVNGEQLHALRGILQFVGNGSRIIITTRDLHLLMNFQVDGVYTMKPLRDHESLELFCRIAFKQESPEGEFMELSRRVVAYTEGLPLALKV 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0441 113 Pfam NB-ARC domain 14 113 IPR002182 GO:0043531
Lele39g0441 113 Gene3D - 69 113 IPR042197 -
Lele39g0441 113 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 113 IPR044974 GO:0006952
Lele39g0441 113 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 113 IPR027417 -
Lele39g0441 113 Gene3D - 1 63 IPR027417 -
Lele39g0441 113 PRINTS Disease resistance protein signature 12 26 - -
Lele39g0441 113 PRINTS Disease resistance protein signature 104 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0441 Lele-ChrLele39 3431725 3432627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0441 4 113 WRKY Transcription Factor Family AT5G45050 32.432 7.83e-11 55.8