Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0430 ATGTTTAGAGTCTTTGCGATTGCACTTGCTTGTTGCCGGAAGAGGAGACCACAAGACGCAGAGGAGGACCCTGATGAAGTTCGCCTTGGTCAGATTAAAAGGTTTTCTCTGTGTGAGCTGCAAGTTGCAACGGACAACTTCAGTAACAAAAACATTCTGAGTATAAGTGAATTTACTGAGGTTTACAAAGGACGATTAGCCGATGGGTCTCTGGTTGCAGTGAAAAGACTTAAAGAGGAACGCACTCATCAGAGTAGCAGAGAGCGGCGATTTCAAACAGTAGAAATTATGAGCTTGGCTGTCCACCGTAATTTGCTGCGGCTGCGTGGCTTTTGCATGACACCGACTGAACTGTTACTGGTGTGTCCTTTCATGGCTAACGGTAGTTTGGCATCATGGTTACGAGCTGCTAGGGGCCTTGCTTATTTGCATGATCATTCAAAGATCATTCACGGTGATGTCAAAGCTGCAAATATATTATTGGATGAGGAATATGAGGCAGTTGTCGGGGGCTTTGGCTCGGCAAAACTCATGGATTACAAAGATACTCATGTTAACCCATTTCCGTTTAGTACAATTGGGCATATTGCCCCAGAATACCTCTCCACCGGAAATTCTTCGGAGAAAACTGATGTTTTTGGTTATGGCGTGATGCTTCTTGAACTAATAACTGGACAGAGGGCTTTCGATCTTGCACGATTTGTCAATAATGATGATGCCATGTTAATTGATTGGGTGAAAGGGCTTCTGAGATACAACAGATTGGAAACACTTATGGATGCTGATTTGGGGGATGAATATGATGAAGATGAGGCCGATCGACTACTCAAAGTTGCCTTGCTATGCACACAATACTGTGTTATGGATAGACTAACAATGTCTGAGGTGGTAAGCATTCTTGATGATGGTTCGGCTGAAAAATGGGATAGTTCAGATATCCTCTCAGAAGAACTGTCAAGTCCCAGATGA 969 0.4365 MFRVFAIALACCRKRRPQDAEEDPDEVRLGQIKRFSLCELQVATDNFSNKNILSISEFTEVYKGRLADGSLVAVKRLKEERTHQSSRERRFQTVEIMSLAVHRNLLRLRGFCMTPTELLLVCPFMANGSLASWLRAARGLAYLHDHSKIIHGDVKAANILLDEEYEAVVGGFGSAKLMDYKDTHVNPFPFSTIGHIAPEYLSTGNSSEKTDVFGYGVMLLELITGQRAFDLARFVNNDDAMLIDWVKGLLRYNRLETLMDADLGDEYDEDEADRLLKVALLCTQYCVMDRLTMSEVVSILDDGSAEKWDSSDILSEELSSPR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0430 322 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 29 309 - -
Lele39g0430 322 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Lele39g0430 322 Gene3D Transferase(Phosphotransferase) domain 1 125 315 - -
Lele39g0430 322 Pfam Protein kinase domain 57 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0430 322 FunFam Somatic embryogenesis receptor kinase 1 17 124 - -
Lele39g0430 322 SMART serkin_6 47 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0430 322 FunFam Somatic embryogenesis receptor-like kinase 1 129 318 - -
Lele39g0430 322 ProSiteProfiles Protein kinase domain profile. 47 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0430 322 SUPERFAMILY Protein kinase-like (PK-like) 32 298 IPR011009 -
Lele39g0430 322 Gene3D Phosphorylase Kinase; domain 1 18 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0430 Lele-ChrLele39 3179732 3181086 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0430 1 309 Receptor kinase-like Gene Family AT4G33430 66.667 1.95e-142 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele39g0430 Pkinase 2.1e-30 CL0016