Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0421 ATGAAACGAACTGAACGGTTACTGGTGTATCCTTTCATGTCTAACGGTAGTTTGGTATCATGGTTACGAGAGTACCTTTTCACCGGAAATTCTTCGGAGAAGACTGATGTTTTTAGTTATGGTGTGATGCTTTTTGAAATAATAACTGGACAGAGGGCTTTCGATCTTGCACGATTTGTCAATAATGAAGATGTCATGTTAATTGATTGGGTGATACGGCTTGTGAAAGACAAGGGATTGGAAACACCTATGGATGCCGATTTGGGGGATGAATATGATGAAGATGAGGCCGAGCTACTACTCCAAGTGGCCTTGCTATGCACACAAAACTCGGCAATGGAAAGACCATAG 351 0.4188 MKRTERLLVYPFMSNGSLVSWLREYLFTGNSSEKTDVFSYGVMLFEIITGQRAFDLARFVNNEDVMLIDWVIRLVKDKGLETPMDADLGDEYDEDEAELLLQVALLCTQNSAMERP 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0421 116 Pfam Protein tyrosine and serine/threonine kinase 23 54 IPR001245 GO:0004672|GO:0006468
Lele39g0421 116 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 24 116 - -
Lele39g0421 116 SUPERFAMILY Protein kinase-like (PK-like) 24 116 IPR011009 -
Lele39g0421 116 Gene3D Transferase(Phosphotransferase) domain 1 13 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0421 Lele-ChrLele39 3053419 3054267 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0421 16 116 Receptor kinase-like Gene Family AT4G33430 63.366 6.46e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele39g0421 PK_Tyr_Ser-Thr 3.1e-05 CL0016