Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0416 ATGTCTTCCTCCTTCACCTCTTCATCCACTAAACCCAAACTGACTTCCGAATACGAAGTGTTCTTAACTTTCTTCAATGGTCCTGAAGGCCGTGATATAACCTTTCTTGAGAATTGTTATCGTGTGATAATCTTTCTTGCGAATTGTTTAAGGGATGCTGGAATCAAAACCTGTATTAATGACATCGTCAAGGATACCATATGGGAGATGATAGAAAGGTGTAGAATTGTGGTGGTGGTAATCACACCACAGTTCGTTAGTTCCGACGTTTGTCTTCAGAGACTGGTGAAGATAATGTCGGATCCCATAACAGTATTGCCTTTCTTCTATGGATTGAGCCAGAACGAAGAGCGTGTGCAGTTCCGAAGATTGGTGAATGGACAAGCGGGCCTGCAGTTGGGGAGTTTGCATTTGCGAAGATTCGACGATTCCTTTTTCGATTGGGATTTGCAACGAAGAGCCGACGCTCCTTCACTTGAAAATCCAAGCCGCAAGGTATCTTCTCCCTCCTCCGTCTCCATTGCTGCCTTCTCCTCCATCTCCTCCATCTCTCTGGCATTGCCTACTCCTCCATCTATGTTTGAGTTTGCTCGATCCGGTTTGAGTATGACAACAAGAACCAAACTTAAAATTGCACCTAGCAATAGATCATGTAAAGTGAACAAGTTGGGCCACAATGAGTCCCTTCAGCTTTTCGGTTGGCATGCATTTAAAAGATTTGGCCCAACAAATGATTTTGTGGATCTTTCTAGTAAAGTAGTTACTTTATGTGAAGGGCTACCATTAATTCTTGAAGTTATAGGCTGTCTTTTACACAATAAGACAATATCAGAGTGGCGAAAAGTATTGAATAAATTAAAAGATGTTCCAAGTGACCAAATAGAACATAAGCTTAAAATAAGCCTTGACTTTTTAGCTGATTCAGAAAAGAAATTATTTTATGATATAGCATGCTTTCATGTGGGCCGGAGCAAAAGTTATGTTACACAGGCGTGCAAGGGCTCAAGATTTCCCATAGAAATGGCAATGCAGGGAACGATAGCTATTGAGGGACTGTCCTTAAGCATGCCAAGAAACAATTCAACATCCTTAAGTACCAAGGCATTTAAGAAGATGAAGAGGCTTCGTTTACTCGACTTTGATAATGTGCAGCTTACTGGAGACTATGGTTATATGTCTAAAGAATTAAGATGGCTTTGTTGGTATAGCTGTCTCTTAGAAAACTTGCCAACGGACTTCAATCTTGAAAAGATAGTTGCCATTGAGTTAAAGTGGAGTAATCTCACAATAGTATGGGAGAAAAGCCAGGTGCTGGAATGGTTGAAAATTCTCAATTTGAGTCATTCTCATTGCCTAAGAGAAACACTTGGCTTTTCAAAATTACCATATCTTGAGAAGTTGATACTTAAAGATTGTCCACATTTGTCTACGATTCACCCTTCCATTGGAAACCTTAGACATCTTAGTATGTTAAATTTAAAAAATTGCACTGGCTTGGAGCATCTCCCAAGAAGTATATATGACTTGAAATCTTTGAGAACTCTCAATCTCTTTGGTTGTTCAAAGATTGAAAAGTTGGATGAAGACATTGAGAAAATGGAATCCTTAACAGTTTTGGTGGCAAGTCAGACTGCTATCACACAAGTTCCCAAATCACTAGTGAGACTGAAGAACATTAAATACGTTTCTTTATGTGGTCATGAAGGAATGTCACGTGATGTATTTCCATCTCTTATTTTGTCATGGATGCCCCCAACAAATCATTCAAAGTCCTTGTTTCAAGCACTTGGTATCATGCCATCGTTAATCAAGTGTCTTTCCCATCCTTTGTTTGCCAAAAGTCGTGAATTATTCAAAGCAATACCAAGAACTTCTCAAGCTTCATGCAAAAAGATTCCAACATTGATTGGTTTTCATGAGCAAGTTCACAAGGAAAACTCAGAAACACTCCTGAGTTCTATTACTATTCGTGTAGGCGAATTCAACAAAGTTATTGACACGCTTTTAGATAGTATTTCACAGGGATGCAATGAAAGAGGGTTTGGAGTTAACTCTCTTCCTGGAGACAATCATCCTCATTGGTGGAGTTTTAAAGGTGAAGGATCTTCAATGTTCTTTGAAGTTCCTCAAATTATTGGCAAAAATTTGAAAGGATTGATTCTGTGCATAATCTATTTTTCATCTCAAGACATCATGACATCCGTATATCCTGTTGGTGTCTTGGTCTCGAACCGTACAAAGGGTACCATTAAACTCTACAAGAAAGATGCGACAAGTGCTTCAAAGGATGAAGATAATTGGAAACACATAATTTCCAACTTGGAGGCTGGTAACAGAGTGGAGGTTATAGTCACCTTTGCATGTGAATTGAGAGTGAAAAGTACACTTGTCTATTTGGTATATGAAGAAGATGTCAGCAAGAGAATCATGTATTGA 2436 0.39 MSSSFTSSSTKPKLTSEYEVFLTFFNGPEGRDITFLENCYRVIIFLANCLRDAGIKTCINDIVKDTIWEMIERCRIVVVVITPQFVSSDVCLQRLVKIMSDPITVLPFFYGLSQNEERVQFRRLVNGQAGLQLGSLHLRRFDDSFFDWDLQRRADAPSLENPSRKVSSPSSVSIAAFSSISSISLALPTPPSMFEFARSGLSMTTRTKLKIAPSNRSCKVNKLGHNESLQLFGWHAFKRFGPTNDFVDLSSKVVTLCEGLPLILEVIGCLLHNKTISEWRKVLNKLKDVPSDQIEHKLKISLDFLADSEKKLFYDIACFHVGRSKSYVTQACKGSRFPIEMAMQGTIAIEGLSLSMPRNNSTSLSTKAFKKMKRLRLLDFDNVQLTGDYGYMSKELRWLCWYSCLLENLPTDFNLEKIVAIELKWSNLTIVWEKSQVLEWLKILNLSHSHCLRETLGFSKLPYLEKLILKDCPHLSTIHPSIGNLRHLSMLNLKNCTGLEHLPRSIYDLKSLRTLNLFGCSKIEKLDEDIEKMESLTVLVASQTAITQVPKSLVRLKNIKYVSLCGHEGMSRDVFPSLILSWMPPTNHSKSLFQALGIMPSLIKCLSHPLFAKSRELFKAIPRTSQASCKKIPTLIGFHEQVHKENSETLLSSITIRVGEFNKVIDTLLDSISQGCNERGFGVNSLPGDNHPHWWSFKGEGSSMFFEVPQIIGKNLKGLILCIIYFSSQDIMTSVYPVGVLVSNRTKGTIKLYKKDATSASKDEDNWKHIISNLEAGNRVEVIVTFACELRVKSTLVYLVYEEDVSKRIMY 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0416 811 Pfam NB-ARC domain 202 301 IPR002182 GO:0043531
Lele39g0416 811 Pfam TIR domain 47 120 IPR000157 GO:0007165
Lele39g0416 811 Gene3D - 222 306 IPR042197 -
Lele39g0416 811 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 120 IPR044974 GO:0006952
Lele39g0416 811 Gene3D - 1 127 IPR035897 -
Lele39g0416 811 SUPERFAMILY L domain-like 353 577 - -
Lele39g0416 811 PRINTS Disease resistance protein signature 257 271 - -
Lele39g0416 811 PRINTS Disease resistance protein signature 507 523 - -
Lele39g0416 811 Gene3D Ribonuclease Inhibitor 340 659 IPR032675 -
Lele39g0416 811 ProSiteProfiles TIR domain profile. 16 157 IPR000157 GO:0007165
Lele39g0416 811 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 316 IPR027417 -
Lele39g0416 811 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 124 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0416 Lele-ChrLele39 2973110 2982754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0416 345 556 WRKY Transcription Factor Family AT4G12020 33.772 3.05e-16 82.0