Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0401 ATGTGTTCCTTCACCCTCTTCTTCTTCTTCTTCCTCCTTTTGATCTGCGTGAATCAGATTCTCTGTTCAAAACCAGTTCTTTCTTCAGGACGCAGGATCCTTCACGAGCCATTTCAGCCATTGGGTTCTCTTCCTCCTGCTCCGCCTCCTAACCCCCCTCCTCCCCCGCCGGCACCACCCAACACTAAATACCCCTTTTCCACGACTACCCCTAATCAATCTCCGTTTTTCCCTACCTACCCTTCACCTCCTCCTCCCACTTCTCCTGCTTCGTTTGCTTCCTTCCCAGCTAATATTTCCTCTCTTATACTCCCTCACGCATCCAAATCCAAATCCTCTTCCGGTAAACTGCTCGGAGTTGCCATTGGTGCTGTGCTTTGTGCTATTGTTGTCGCTGGCATTTCTGCTTTTGTGTACTGTCGGCGGAGGAGGAAGCGGTACTCTGTCGACGAGAAGACTCTCAGATCCGATAGTAGTCTCCGGTTGTTCCCTCCCAATGCTGAATCTGGTAATGGAGGTCGAAAGGTGAGACACACTTCTTCGACTAGCTCTGAGTTTCTGTATCTTGGTACCATTGTTAATAGGGGTGTTGAGGATCGTTCTGGTTCAAGAGCAAACGATGCTGGTCGGGGTGGACGTAGTGGAGGCGGTGGAGGAGGAAGTGGTGGTGGTGCTGCTGCTGTGGACCCTCGGAAAATGGACTCGCCTGAGCTGCGTCCACTCCCGCCGCTTGCGCGGCAAAGTTCGAGGCAGCAATATGGAGGGGCGCGTGACGATGTGGGTTCCAATACGGCGGACGATGAGGAAGAGGAATTCTACTCGCCCAAAGGGTCTCTGGGTGATCACGAGAGTTCGAATGGCACTGGATCAGGTTCTCGTAGAGTGTTTGCGACGATTGCAAGCGACAATTTTGTGGGTCGAAGCAGTGAATCGAGTTCTAGCTCGTATTCTTCTTCCACTTCGGGCTCACCGGATCGGTCACACTCGATTAGCCTATCACCGCGGGCGAGCTTAAGCCCCAAAAGATCCCAGCCGAAATCGCCGGAATCTATAGTGGTGGACAGCTCTCCTCTGCTGACATCATCCCCACCGCTACCACAGCCACCACCGCTTGCTCATCCTCAGACTGAAGCACACTTAGGCGAGGGATCTTTACGGTCATCGTCAGTTAGAAGCCACTTTTCTCCATCTCCGGTCCACAATCAGCATGTTCAATCTTCTTCAATGTCTTCATTATCTTCAACACCAGAGAGAGCTTCTGGTCGAGATGGTAAGTCCCCTTTGCTGTCTCCACTCTCGTTATCACCAAATAGAGCTGCAGGGAAGAACCCAGATAGGGAAGCGAGAACATCGGGCGTCACATTTGAAAATGTGCATTCTTCCTCCTCCTCATCGCCTGAGAGATGTGTTGAGAAAAAATCAGATGCAACAGAGAGACAAGATGAGAACTTTTATTATTCGTCATCAGGATTACCCAATGCATCACCAGATAAAAATGCTGAGAAAATTTCACCGGGATCAACAAGATTATCCACTACCTCGCCTGAAAGGAACGTGGAGAAAATTTCATCTGCTTCCCCGCAGAGAAATTCTGAGAAAATTTGCCTCGAGTCTCCAAGATTATCCACCGCATCATGTGAGGGAAGTGCGGAGGCAGCATTATGTGCGTCACCAAGATTATCCAATGCATCCCCGGGGAGAAACGTGGAGAAAATTTCATGTGCGTCACCGAGATTATCCAATGCTTCGAATCAAAGTGAGAAGTCTCTGTCGTCCTCTTCAGCTTTCTCTCTGCCATCATCACCTGAGAAAGTGGTTGAGCATGGTTTGGATCAGTCCCCAAGTCTATCAAATGTTTCAGATCGTTATAGGCAATCTCCTATGCCAAACCTGCTTTCATCGCCGGAAAGAGAATCCTACAACACTTCAGTTCATTTTGCTTCAGTTGAACATGTTCTTGATCAAACCAGAGATTATCCAGCTCCTCCTCCTCCACCTCTTCAACCACAGAGAAAACACTGGGAGATTCCCATCCTCTCATCACTTTTTGGTCAACCAGCAAGAGTGGATAAAGTTTTGGATCAAAATGCGGAATCTCCAGCTCCTCCTGCACCACCACAGCGGAAACATTGGGAGATTCCAGTTTTCTCAACACTCAATGCTCAGCCTAAAGTTTCTCCCCCTCCCCCTCCCCCTCCACCACCACCGCCTCCACCTCCGCCGCCACCCAACCAGCGAACACGAAAGCAATGGGAAATTCCATCAACTTCAACACCTACTGGTCAGCCAGTTTCAAGGCCGCCAGAACTAATACCACCTTCAAGGCCTTTTGTGTTGCCAAATCCAACGACGGATATGTCTCCAGTTGTGTTGCCTCCAAATTCTCAAGAACAGAATTTTGGGATAAATGAGGAGACCCCAAAACCAAAGTTGAAGCCATTGCATTGGGATAAAGTGAGAGCTAGCTCTGATCGTGAAATGGTCTGGGATCAGTTGAGATTAAACGAGGAAATGATTGAGACATTGTTTGTTGTCAATACACCAACTCCAAAACCAAAGGATACCGCACCACGTTCAGTTCTTCCTACACCAAAACAGGAGGACAGAGTACTTGATCCTAAGAAGTCACAAAATATTGCAATTTTACTGAGGGCACTTAACGTGACTGTTGAAGAAGTTTGTGAAGCATTATTAGAAGGTAGTGCTGATACGCTTGGAACAGAACTACTCGAAAGCTTGTTAAAGATGGCACCAAGCAAGGAAGAAGAACGTAAACTGAAGGAGCATAAAGAGGACTCACCGACCAAGCTTGGTCCTGCAGAGAAATTCTTGAAGGCTCTGCTTGATGTACCATTTGCCTTCAGAAGGGTGGAAGCCATGCTTTACATAGCTAATTTCGAGTCTGAAGTTGAGTATCTCAGGAAATCTTTTGAAACTCTAGAGGTTGCCTGTGAGGAGCTACGCAACAGTAGAATGTTTTTGAAGCTTCTAGAGGCTGTGCTCAAAACTGGGAATCGCATGAATGTGGGGACAAACCGTGGCGATGCACATGCCTTCAAGCTTGATACACTTCTCAAGCTTGTTGATGTTAAAGGTGCTGATGGGAAGACCACCCTACTGCATTTCGTTGTACAAGAAATTATAAGAACCGAAGGTGCTCGTCTCTCGGGTACTTCACAAACTCTCAACTCCTCTTTGAGCGAAGACGCTAAGTGTAGGAGGCTTGGTCTACAGGTTGTTTCCAGTCTGAGTTCAGAGCTAGCAAACGTAAAGAAGGCTGCTGCAATGGATTCTGAGGTTCTCAATGGTGATGTCTTCAAACTTTCTAAAGGAATTTCTTACATAACAGAGGTAGTGAAACTAAACGAAGCAACAAAGCAAGATGAAAGTGGTAAAAAGTTTACAGAATCAATGGACAAATTTATTAGGATGGCTGAGGAGGAGATCCTCAAGATTCAAGCCCAAGAAAGTGTTGCTCTTTCCTTAGTGAAGGAGATTACTGAGTATTTCCATGGTAACTTGGCAAAAGAAGAAGCTCATCCATTCAGAATCTTCATGGTGGTAAGAGACTTTTTATCGGTTCTCGATCGAGTCTGCAAAGAGGTCGGTTTAATAAACGAGAGGACGGTGGTTAGTTCTGCCCATAGATTCCCAGTTCCAGTAAACCCCATGCTTCCACAACCCCTAAACCCTATGCTTCCACAACCCCTACCTGGATTATTTGTAAAAAGACAATCCAGCTCTTCTGATGACGATAGTCCCTCTCCATAG 3771 0.4726 MCSFTLFFFFFLLLICVNQILCSKPVLSSGRRILHEPFQPLGSLPPAPPPNPPPPPPAPPNTKYPFSTTTPNQSPFFPTYPSPPPPTSPASFASFPANISSLILPHASKSKSSSGKLLGVAIGAVLCAIVVAGISAFVYCRRRRKRYSVDEKTLRSDSSLRLFPPNAESGNGGRKVRHTSSTSSEFLYLGTIVNRGVEDRSGSRANDAGRGGRSGGGGGGSGGGAAAVDPRKMDSPELRPLPPLARQSSRQQYGGARDDVGSNTADDEEEEFYSPKGSLGDHESSNGTGSGSRRVFATIASDNFVGRSSESSSSSYSSSTSGSPDRSHSISLSPRASLSPKRSQPKSPESIVVDSSPLLTSSPPLPQPPPLAHPQTEAHLGEGSLRSSSVRSHFSPSPVHNQHVQSSSMSSLSSTPERASGRDGKSPLLSPLSLSPNRAAGKNPDREARTSGVTFENVHSSSSSSPERCVEKKSDATERQDENFYYSSSGLPNASPDKNAEKISPGSTRLSTTSPERNVEKISSASPQRNSEKICLESPRLSTASCEGSAEAALCASPRLSNASPGRNVEKISCASPRLSNASNQSEKSLSSSSAFSLPSSPEKVVEHGLDQSPSLSNVSDRYRQSPMPNLLSSPERESYNTSVHFASVEHVLDQTRDYPAPPPPPLQPQRKHWEIPILSSLFGQPARVDKVLDQNAESPAPPAPPQRKHWEIPVFSTLNAQPKVSPPPPPPPPPPPPPPPPPNQRTRKQWEIPSTSTPTGQPVSRPPELIPPSRPFVLPNPTTDMSPVVLPPNSQEQNFGINEETPKPKLKPLHWDKVRASSDREMVWDQLRLNEEMIETLFVVNTPTPKPKDTAPRSVLPTPKQEDRVLDPKKSQNIAILLRALNVTVEEVCEALLEGSADTLGTELLESLLKMAPSKEEERKLKEHKEDSPTKLGPAEKFLKALLDVPFAFRRVEAMLYIANFESEVEYLRKSFETLEVACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTSQTLNSSLSEDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLNGDVFKLSKGISYITEVVKLNEATKQDESGKKFTESMDKFIRMAEEEILKIQAQESVALSLVKEITEYFHGNLAKEEAHPFRIFMVVRDFLSVLDRVCKEVGLINERTVVSSAHRFPVPVNPMLPQPLNPMLPQPLPGLFVKRQSSSSDDDSPSP 1256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0401 1256 MobiDBLite consensus disorder prediction 279 360 - -
Lele39g0401 1256 SUPERFAMILY Formin homology 2 domain (FH2 domain) 732 1207 - -
Lele39g0401 1256 Pfam Formin Homology 2 Domain 804 1195 IPR015425 -
Lele39g0401 1256 PANTHER FORMIN-RELATED 709 1242 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele39g0401 1256 MobiDBLite consensus disorder prediction 198 540 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 466 480 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 41 67 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 748 764 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 765 779 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 41 64 - -
Lele39g0401 1256 ProSiteProfiles Formin homology-2 (FH2) domain profile. 801 1221 IPR015425 -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 381 420 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 148 180 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 847 868 - -
Lele39g0401 1256 Gene3D Formin, FH2 domain 802 1204 IPR042201 -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 481 540 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 576 671 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 723 747 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 611 649 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 576 600 - -
Lele39g0401 1256 MobiDBLite consensus disorder prediction 687 787 - -
Lele39g0401 1256 SMART it6_source 801 1210 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0401 Lele-ChrLele39 2820172 2825249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0401 29 348 FH2 protein (formin) Gene Family AT3G25500 45.833 2.62e-27 118