Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0397 ATGAAAAGCCCTATTTCATTTTTGTGCTTGTTCTTACAACTTATTCAGGAAAGCTCCAAGCAGTCAATAATGGATTATGATTATGAACCTCCATTGCTAGAAGCCTCCAAGATTCTTCTCCAAAGCTCATCACCAGACACGAGAACGATGACGAATGTGATCGAATCAACAGTGGTGGAGAGCAGTTGTGAGCTTCCTGTGATTGATCTTGGCCGTTTAAACAGTAATAGTGATGTAGACCATCTTGAAAGAGAAGAGTGCAAGAAGGAAATCATTGAAGCAGCTAAACAATGGGGTTTTTTCCAAGTTGTGAATCATGGGATCTCACAACAACTCTTAAAGAAGCTTCTGTTAGAGGAAGTCAAAGTGTTTCATAGGCCTTTTGCAGATAAGTCTCAACAATGTTCCACAACTGTTCATTACAAGTGGGGCAACCCTTTTGCTACTAATATCAGGCAATTCATATGGTCAGAAGCCTTTCATATATTTTTTCCACATGGACAACCAAATATGGCAGACGACCAATCCAAATGTCTGAGATCAATTAGTGAAGCATTTGCTAGAAAGGTGGCCCCTTTGGCAGAAAGCTTGTCTGGAATTCTAAGTCAGGAGTTGAACATCAAATGCAGCTATTTGCGAGAAATGTGTTTGCCAAACACGAGTTTTCTTCGGCTGAATAGATATCCACCATGCCCAATTCCCAAACAGCTGTTTGGGTTATTGCCTCACACTGATTCCACTTTCCTCTCCATAGTGTACCAAGACCAGATTGGGGGATTGCAATTGTTGAAAGATGCGAAGTGGCTTGGAGTCAAACCCAATCCTCATGCTCTCTTGGTCAATATTGGTGATTTATTCCAGGCACTGAGCAACGGAGTATACAGAAGCATAAAACACAGAGTGGTTGCTGCAGAGAAGGAAGAAAGGTTCTCTGTAGCATATTTCTATAGGCCTTCCGATGACTCAGTGATAGAGAGCCATGGCAAACACAAGGTTTACAGAAGCTTCACTTTCAGAGAGTATCAGGAGCAGAATGAGAAAGATTTGAAGCAAACTGGTGATAAAGTTGGCCTCTCCAGATTTCTTTTTGATCAAGAACAGAGGAAATTACAGCTAATGCTAGGTGGAGAAGGAATCGAAGCTCATGCCGCGGCCGCCGCCGACAACGTTGGGTCTCGAGTGATGGTGAACTCAGAGGATGTCATAGATTCTGAGATGTTAAAATATTCTTTTGCAGGGATACATATTAGGGAACCCAATGACTACATGAAGAATTGTAAAGGAGAATATACAGAAATAGACCCTGAAAACTTGTTATGTTCGAGAGTTTTCCAGTCTTTTCAAGAGGGAAACAAATATTCACTGTCCAATTATTTGGCTAACAGTGATGTTGTTCGCCAAGCATTGCATGTTCGAAAGGGAACTGTAAGAAATTGGACGATTTGCAATTGGAACATACCTTTTAAGCATGAGATTGATGGCATTTTTTATTATCATGTGAATCTCAGCACAAAAGGTTATCGCTTATTGATTTACAGTGGTGATCATGAAATGGTATGCCCTTTCTTATCAACACAAGCTTGGATTAGATCTTTGAATTACTCCATTGTTGATGACTGGTGGCCTTGGCATGTCAATGGCCAAGTTGCTGGGTACACAAGGACTTATTCCAATCAAATGACATTTGCAACTGTCAAGGGCGCAGGACATACAGCTCCAGAATTCAAACCTGAAGAGTGTCTTGCCATTTTCAATAGAGGGACATCTAACGAGCGTCTCTGGCAGTATCATATGTTCTTGAAGCGTAGCTAG 1812 0.4128 MKSPISFLCLFLQLIQESSKQSIMDYDYEPPLLEASKILLQSSSPDTRTMTNVIESTVVESSCELPVIDLGRLNSNSDVDHLEREECKKEIIEAAKQWGFFQVVNHGISQQLLKKLLLEEVKVFHRPFADKSQQCSTTVHYKWGNPFATNIRQFIWSEAFHIFFPHGQPNMADDQSKCLRSISEAFARKVAPLAESLSGILSQELNIKCSYLREMCLPNTSFLRLNRYPPCPIPKQLFGLLPHTDSTFLSIVYQDQIGGLQLLKDAKWLGVKPNPHALLVNIGDLFQALSNGVYRSIKHRVVAAEKEERFSVAYFYRPSDDSVIESHGKHKVYRSFTFREYQEQNEKDLKQTGDKVGLSRFLFDQEQRKLQLMLGGEGIEAHAAAAADNVGSRVMVNSEDVIDSEMLKYSFAGIHIREPNDYMKNCKGEYTEIDPENLLCSRVFQSFQEGNKYSLSNYLANSDVVRQALHVRKGTVRNWTICNWNIPFKHEIDGIFYYHVNLSTKGYRLLIYSGDHEMVCPFLSTQAWIRSLNYSIVDDWWPWHVNGQVAGYTRTYSNQMTFATVKGAGHTAPEFKPEECLAIFNRGTSNERLWQYHMFLKRS 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0397 603 Gene3D alpha/beta hydrolase 385 597 IPR029058 -
Lele39g0397 603 SUPERFAMILY alpha/beta-Hydrolases 421 597 IPR029058 -
Lele39g0397 603 SUPERFAMILY Clavaminate synthase-like 48 344 - -
Lele39g0397 603 Pfam Serine carboxypeptidase 442 588 IPR001563 GO:0004185|GO:0006508
Lele39g0397 603 Pfam 2OG-Fe(II) oxygenase superfamily 221 318 IPR044861 -
Lele39g0397 603 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 65 344 - -
Lele39g0397 603 Pfam non-haem dioxygenase in morphine synthesis N-terminal 65 165 IPR026992 -
Lele39g0397 603 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 218 318 IPR005123 -
Lele39g0397 603 Gene3D - 36 351 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0397 Lele-ChrLele39 2770718 2780220 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0397 455 593 Calmodulin-binding Proteins AT2G22960 54.676 2.01e-49 168