Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0390 ATGACTTCATTTTTGAAGCCTGAGAATGCTCTGAAAAGAGCTGAAGAATTGATCAATGTTGGACAGAAGCAGGATGCTTTGCAAACTCTTCATGGCCTTATTACGTCAAAAAGATATAGGGCATGGCAGAAAACACTTGAAAGGATCATGTTTAAATATGTAGAACTTTGTGTAGATATGCGAAAAGGGCGATTTGCAAAGGATGGGCTCATTCAGTATCGAATCATATGTCAGCAAGTTAATGTTAGTTCACTGGAGGAGGTGATCAAACATTTCATGCATCTGTCAACGGAGAAAGCTGAACAAGCTCGCAGCCAGGCACAGGAATTAGAAGAGGCTCTTGATGTTGATGATTTAGAGGCTGATAAAAGGCCGGAGGACTTGATGCTTAGCTATGTGAGTGGAGAGAAGGGAAAAGACAGATCCGACAGGGAGCTTGTTACTCCATGGTTTAAATTTCTTTGGGAAACATACAGGACTGTGCTTGAAATATTGCGCAACAATTCAAAACTGGAAGCTCTATATGCTATGACAGCGCATCGGGCTTTTCAATTTTGTAAACAATATAAGCGAACAACTGAGTTCCGTAGACTTTGTGAAATTATAAGAAACCATCTCTCCAATCTTAATAAATATCGAGACCAACGGGACCGACCTGATCTTTCAGCACCTGAAAGCTTGCAACTATATCTGGATACCAGATTTGAGCAACTGAAAGTTGCCACTGAACTTGAACTCTGGCAGGAAGCTTTTAGATCTATTGAAGATATACATGGACTAATGTGCATTGTGAAGAAAACGCCCAAGGCATCTTTGATGGTTCTTTACTATGCTAAGCTGACAGAAATATTTTGGATGTCATCAAGCCATCTTTATCATGCATGTGCATGGTTCAGGCTCTTTTTGCTGCAGAAGAGCTTCAATAAGAATCTGAGTCAGAAGGATCTGCAATTGATAGCTTCGTCTGTTGTTCTGGCTGCACTTTCAGTGCCTCCTCATGATCACAGTCGAGGTGCATCTCATTTGGAATTGGAGCATGAAAAAGAGAGGAACTTGAGGATGGCTAATCTCATTGGTTTTAACCTTGAAAGTAAACCTGATAGCAGAGAAGTGCTTTCAAGGTCAGCCCTTCTTGCTGAACTGGTGTCCAAGGGTGTAATGTCTTGTGCAACTCAGGAAGTGAAGGACATTTATCATCTCGTAGAACATGAATTTCTTCCCCTCGATCTTCCATCAAAAGTTCAGCCTCTGCTAACCAAAATATCGAAGTTAGGGGGTAAGCTCTCCACTGCTTCTTCGGTCCCTGAGGTGCAGCTGTCTCAGTATGCCCCAGCACTGGAGAAACTAGCAACCTTGAGGTTGCTACAGCAGGTGTCCAATGTATACCAGACAATGAAGATCGAGACCTTATCTGGAATGATCCCCTTTTTTGATTTTTCTGTAGTAGAAAGGATTTCTGTGGATGCTGCTAAGCATAACTTTGTATCCCTGAAAGTTGACCACACGAGGAATGTTGTAGTTTTCAGCAAGACGAGTATTGAGTCTGATGGCTTAAGAGATCACTTGGCTAATTTTGCTGAATATCTGAATAAGGCAAGACAAATGATTTACCCTCCTGATAGGAAGCCATCAAAACTTGGAGCTTTGCTTCCCACTTTGAATGAGGTTGTGGCCAAGGAACACAAGAGGCTTCTGGCACGGAAATCAATTATTGAGAAGCGAAAAGAAGAACAAGAACGGCATCTTCTTGAAATGGAAAGAGAAGAGGAATCGAAGAGATTAAGACTTCAGAAAATAACTGAAGAAGCAGAACAAAGAAGACTTGCCAATGAGTATGAGCAGAGGAAGAACCAGAGAATTCTCAGAGAAATAGAAGAAAGAGAAATGGAAGAAGCTCAGGCATTGCTTCAGGAAGCTGAGAAGCGCATTAAAAAGAAGGGAAAGAAGCCAATCATAGAGGGTGAAAAAATGACCAAGAAAACACTGATGGAGCTGACTTTGACTGAACAACTCCGGGAAAGGCAAGAAATGGAAAAGAAACTTCAAAAACTAGCTAAAACGATGGACTATTTGGAAAGAGCCAAAAGAGAGGAGGCTGCTCCCTTGATTGAAGCTGCATATCAAAAGCGCCTAGTTGAAGAAAAGCTTCTTCATGAGCGTGAGCAACAGCTTGAGATTGAAGTTAGCAAACAGTGCCATGAGGGAGATCTCAAGGAGAAGGAAAGACTGGCTCGTATGGTTGGCAATAAAGAGATTTATCAGCAGAGAGTTGTCAGTCATCGCCAGGCAGAATTTAGTAGATTGAGGCAGGAAAGAGAGGAGCGAATCTCAAGGATTTTACAGTCCAGGAGACAAGAGAGGGAAAAGATGAGGAAGTTGAAGCATTATCTGAGGTTAGAAGAAGAGAGACAGCAAAAATTGTTTGAAGAGGAGGAAGCTCGGAAGCGTGAAGAGGCTGAGAGGCGGAAGAAGGAAGACGCTGAGCGCTTGGCGAAATTGGCTGAGATAGCAGAAAAGCAAAGGCAAAGAGAGCGGGAACTTGAAGAGAAGGCTGAGAGGCAGAAGAAAGAAGCACTGTTTGGAAGAAGTGGTGAAGCAGCTTTGAAGCCTCTTGAACCTTCAGGCCGCCCATTAGAGGGTGGTTCTTCCTCTGCCGCTCCTGCAGCAGCACCTGCTGCTGCAGCTGCACCAACCCCTGGGAAATATGTCCCTCGTCACCGCCGCGACAGAACTGAAGCCCCAAGCCCTGCTGCTGGTCCTCCAGAAACTGATCGATGGACAAACTCCAGCAGGCAGGATGGTGACAGATGGCGTAGTGATGATCGAAGGCCTGCGTTTGGTGCTGAGGGGAGTTCGAGGTCATCATCAACATGGTCCTCAACCAGGCGTGGATCTGATCGTTGA 2904 0.4408 MTSFLKPENALKRAEELINVGQKQDALQTLHGLITSKRYRAWQKTLERIMFKYVELCVDMRKGRFAKDGLIQYRIICQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQELEEALDVDDLEADKRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLSNLNKYRDQRDRPDLSAPESLQLYLDTRFEQLKVATELELWQEAFRSIEDIHGLMCIVKKTPKASLMVLYYAKLTEIFWMSSSHLYHACAWFRLFLLQKSFNKNLSQKDLQLIASSVVLAALSVPPHDHSRGASHLELEHEKERNLRMANLIGFNLESKPDSREVLSRSALLAELVSKGVMSCATQEVKDIYHLVEHEFLPLDLPSKVQPLLTKISKLGGKLSTASSVPEVQLSQYAPALEKLATLRLLQQVSNVYQTMKIETLSGMIPFFDFSVVERISVDAAKHNFVSLKVDHTRNVVVFSKTSIESDGLRDHLANFAEYLNKARQMIYPPDRKPSKLGALLPTLNEVVAKEHKRLLARKSIIEKRKEEQERHLLEMEREEESKRLRLQKITEEAEQRRLANEYEQRKNQRILREIEEREMEEAQALLQEAEKRIKKKGKKPIIEGEKMTKKTLMELTLTEQLRERQEMEKKLQKLAKTMDYLERAKREEAAPLIEAAYQKRLVEEKLLHEREQQLEIEVSKQCHEGDLKEKERLARMVGNKEIYQQRVVSHRQAEFSRLRQEREERISRILQSRRQEREKMRKLKHYLRLEEERQQKLFEEEEARKREEAERRKKEDAERLAKLAEIAEKQRQRERELEEKAERQKKEALFGRSGEAALKPLEPSGRPLEGGSSSAAPAAAPAAAAAPTPGKYVPRHRRDRTEAPSPAAGPPETDRWTNSSRQDGDRWRSDDRRPAFGAEGSSRSSSTWSSTRRGSDR 967
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0390 967 MobiDBLite consensus disorder prediction 807 862 - -
Lele39g0390 967 Gene3D UVR domain 217 267 - -
Lele39g0390 967 Coils Coil 568 602 - -
Lele39g0390 967 ProSiteProfiles PCI domain profile. 316 513 IPR000717 -
Lele39g0390 967 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT 1 955 IPR027512 GO:0005852
Lele39g0390 967 Coils Coil 93 120 - -
Lele39g0390 967 Coils Coil 667 697 - -
Lele39g0390 967 FunFam Eukaryotic translation initiation factor 3 subunit A 268 342 - -
Lele39g0390 967 Coils Coil 615 649 - -
Lele39g0390 967 SMART PINT_4 441 532 IPR000717 -
Lele39g0390 967 MobiDBLite consensus disorder prediction 928 947 - -
Lele39g0390 967 Hamap Eukaryotic translation initiation factor 3 subunit A [EIF3A]. 1 965 IPR027512 GO:0005852
Lele39g0390 967 MobiDBLite consensus disorder prediction 807 967 - -
Lele39g0390 967 Pfam PCI domain 373 510 IPR000717 -
Lele39g0390 967 Gene3D - 268 342 - -
Lele39g0390 967 Gene3D - 354 493 - -
Lele39g0390 967 FunFam Eukaryotic translation initiation factor 3 subunit A 352 494 - -
Lele39g0390 967 FunFam Eukaryotic translation initiation factor 3 subunit A 217 268 - -
Lele39g0390 967 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 441 532 - -
Lele39g0390 967 Coils Coil 799 857 - -
Lele39g0390 967 MobiDBLite consensus disorder prediction 949 967 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele39g0390 Lele-ChrLele39 2729536 2734923 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0390 1 966 Eukaryotic Initiation Factors Gene Family AT4G11420 71.458 0.0 1309