Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0386 ATGGTTCTGAGTAGCCGAACTTTCTGGGCTCATGTTAGTATTATTAATTTCCTGTTGCTGCTTAGTTGTAGCATGACCTACGGAACTAAGACTGATATCTTCTGCTTGCAAAGGATAAAAGATTCACTTGAAGATCCATATGGTTATTTGAATTCTTCATGGGATTTCAACAACAACACAGAAGGATTTATCTGCAGATTCACTGGTGTTGATTGTTGGCACCCTGATGAGAATAAAGTCTTAAATCTCAAGTTGTCAAACATGGGCCTCAAGGGCCAGTTTCCTCGTGACATTCAAAACTGCTCCAGCTTAACAGGATTGGATCTGTCAATTAACAAACTCTCTGGAACAATCCCAGCAGACATCAATAATCTCCTTAAATTTGTGACAACTCTTGATCTATCTTCAAATAACTTTTCTGGGACGATCCCTGTGGGTCTTGCAAATTGTTCTTATCTTAATTCTGTCAAACTGGATCAAAATCGACTCAGTGGGCAAATTCCGGGAGAAATCAGCACGCTTACAAGGCTAAAGACATTTACTGTCACAAACAATCTTTTGACGGGACCAATTCCAAACTTTCGAAACAGCCCAGCTGATAGCTATGCAAATAATGCTGGACTATGTGGTGGCCCTTTGCCAGCCTGCCAGGCCGCCTCCAAGAGTAACTCTGCAGTTATAGCCGGAGCAGCTGTTGGTGGGGTGACGGTTGGAGCATTAGCAATAGGTATTGGATTGTTCTTCTTTGTCAGAAGAGTATCAGTGATTAAGAAGGAAGAAGATCCTGAAGGCAACAAATGGGCAAGAAGTCTAAAGGGAACTAAAGGAATAAAGGTTTCAATGTTTGAGAAGGCAGTTTCAAAAATGAAATTGGGTGATCTCATGAAGGCTACTAACAACTTCAGTAAAGGCAATATTATTGGGTCTGGAAGAACAGGAACGGTGTACAAAGCTGCCCTTGATGATGGCACATCACTCATGGTTAAGAGATTGCAGCAATCTCAACATTCTGAGAAAGAATTTCTGTCTGAGATGTCTACCCTCGGGGCTGTCAGACATCGTAACTTGGTTCCTCTTTTAGGCTTTTGTGTGGCCAAGAAGGAGAGGCTTTTGGTCTATAGTTTTATGTCAAATGGCACTCTTCATGATCAGCTGCATCCTGCTGAAGGTCAGAGCACCCTAGAATGGCCTGTAAGGCTTAAAATTGCTATCGGAGCAGCTAAAGGATTAGCATGGCTCCATCATAGCTGCAATCCCCGTATCCTCCATCGTAACGTAAGCTCTAAGAGCATCTTATTGGATGCTGATTTTGAGCCCAAAATTTCTGATTTCGGCCTTGCTAGATTGATGAACCCAATTGATACACATTTGAGTACTTTCGTGAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCCGAGTACGCGAGAACACTGGTGGCTACACCTAAGGGAGATGTTTATAGCTTCGGAGTTGTTCTTCTCGAGTTGGTGACCGGTGAAAGACCCACCCACGTGGCTAAAGCTCCAGAAACATTCAAGGGAAGTTTGGTTGAATGGATTAACCAACTCTCAAGCAACTCTGAACTGCAGACTGCCATTGATGAGCCGTTAGTTGGGAATGGATTTGATGATGAGCTTTTCCAATTTCTTAAGGTTGCCTGCAACTGTGTTTCATCAAATGCAAAGGAAAGGCCCACTTTGTTTGAAGTATACCAATTTCTGAGAGCCATTGGGAGTAGGTACAATTTCACAACTGAGGATGAGATATTGGTACCTACAGATATTGGTGATGCTGGAAATCTAGAAGAGCTTATTGTGGCTCGAGAATAA 1833 0.4266 MVLSSRTFWAHVSIINFLLLLSCSMTYGTKTDIFCLQRIKDSLEDPYGYLNSSWDFNNNTEGFICRFTGVDCWHPDENKVLNLKLSNMGLKGQFPRDIQNCSSLTGLDLSINKLSGTIPADINNLLKFVTTLDLSSNNFSGTIPVGLANCSYLNSVKLDQNRLSGQIPGEISTLTRLKTFTVTNNLLTGPIPNFRNSPADSYANNAGLCGGPLPACQAASKSNSAVIAGAAVGGVTVGALAIGIGLFFFVRRVSVIKKEEDPEGNKWARSLKGTKGIKVSMFEKAVSKMKLGDLMKATNNFSKGNIIGSGRTGTVYKAALDDGTSLMVKRLQQSQHSEKEFLSEMSTLGAVRHRNLVPLLGFCVAKKERLLVYSFMSNGTLHDQLHPAEGQSTLEWPVRLKIAIGAAKGLAWLHHSCNPRILHRNVSSKSILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYARTLVATPKGDVYSFGVVLLELVTGERPTHVAKAPETFKGSLVEWINQLSSNSELQTAIDEPLVGNGFDDELFQFLKVACNCVSSNAKERPTLFEVYQFLRAIGSRYNFTTEDEILVPTDIGDAGNLEELIVARE 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0386 610 FunFam Nuclear pore complex protein NUP107 29 193 - -
Lele39g0386 610 Gene3D Phosphorylase Kinase; domain 1 262 375 - -
Lele39g0386 610 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 80 577 - -
Lele39g0386 610 FunFam Leucine-rich repeat receptor-like protein kinase 376 586 - -
Lele39g0386 610 SUPERFAMILY Protein kinase-like (PK-like) 280 575 IPR011009 -
Lele39g0386 610 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 262 375 - -
Lele39g0386 610 ProSiteProfiles Protein kinase domain profile. 301 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0386 610 Gene3D Ribonuclease Inhibitor 30 217 IPR032675 -
Lele39g0386 610 Gene3D Transferase(Phosphotransferase) domain 1 376 592 - -
Lele39g0386 610 Pfam Protein tyrosine and serine/threonine kinase 303 574 IPR001245 GO:0004672|GO:0006468
Lele39g0386 610 CDD STKc_IRAK 307 575 - -
Lele39g0386 610 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Lele39g0386 610 Pfam Leucine rich repeat N-terminal domain 31 73 IPR013210 -
Lele39g0386 610 SUPERFAMILY L domain-like 31 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0386 Lele-ChrLele39 2720021 2722285 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0386 12 589 Receptor kinase-like Gene Family AT3G28450 48.469 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele39g0386 PK_Tyr_Ser-Thr 3.7e-39 CL0016