Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0383 ATGGCGAACTCACAAAACTCCCATTCCCTATCATCCAAACCTCTCCACAACGAAGATGACAGTTTCTCCACCGCCATACTGATTTGCAATTCTACTGCTATTTCAATGGCTATGCAAACGGTGGTGGAGCTCGGCCTCTTTGACATCATTCACAAAGCTGGCCCCGACGCAAGGCTCTCCGCCGCTGAGATCGCATCGAAGCTCCCTTCCAAGAACCCCGGTGCGCCTACCTGGGTTGATTGTCTCCTCCGGCTTCTGGCGGATTATTCTGTGCTTCACTGTGCCATTGACACTGATGGAAATCAAGAGACGGGCGATGTCCGGCGATTGTATGGCCTCACTCCGGTGGCTAAATTCTTTCTACCAGATGTCCATGGTGCAACCCTGGGCCCTTATATTAAGATGGCTCAACATGAACGCCACATCAACTGTTGGTCGCACATGAAAGATTCAATTTTGGAAGGTGGTGATAGTCCATTCAAGAGGTGCAATGGCTCTGATTTTTATGATTATACGAAATTGGATTTGAGTTTCGGAGCCGTCTTTAATGAAGGAATGGTGAATTATACCACTATCATTATGAACAAGATTCTTGAAACCTACAAAGGTTTTGAGGAACCCAATAGCCTTGTGGATGTTGGAGGCGGTCTTGGAATTAGTCTCAACATGATCACTTCTAAATATCCTCATATTCAAGGAATCAATTTTGACTTACCAACTGTCATACAAGAAGCTCCTTCATATCCTGGCGTGAGACACGTGGGAGGAGATATGTTTGAAAGTGTGCCAAAAGCGGATGCAGTCTTCATGAGGTGGATACTTCAAGATTGGAGTGATGAGCGGTGCGTGAAGCTGTTAAAGAACTGCTATGATGCCACTCCAAAGAATGGGAAACTGATATTGGTGCATGCTGTTCTGGGCACTGAACCAGATACTTCTGCTACTACTAAGATTAACAACCAATTTGAAATTTTCTTAAGAACTTATACAGGTGGCAGAGAGAGAACCAAGCAGGAGTACATGAATTTGATTAAATCTGCTGGGTTTAGTGGCATTAGATTTGAATGCCTTGTTTATGCTGTGTGGGTCATGGAGATCTTTAAGTAG 1107 0.4472 MANSQNSHSLSSKPLHNEDDSFSTAILICNSTAISMAMQTVVELGLFDIIHKAGPDARLSAAEIASKLPSKNPGAPTWVDCLLRLLADYSVLHCAIDTDGNQETGDVRRLYGLTPVAKFFLPDVHGATLGPYIKMAQHERHINCWSHMKDSILEGGDSPFKRCNGSDFYDYTKLDLSFGAVFNEGMVNYTTIIMNKILETYKGFEEPNSLVDVGGGLGISLNMITSKYPHIQGINFDLPTVIQEAPSYPGVRHVGGDMFESVPKADAVFMRWILQDWSDERCVKLLKNCYDATPKNGKLILVHAVLGTEPDTSATTKINNQFEIFLRTYTGGRERTKQEYMNLIKSAGFSGIRFECLVYAVWVMEIFK 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0383 368 FunFam Caffeic acid 3-O-methyltransferase 4 120 - -
Lele39g0383 368 Gene3D Vaccinia Virus protein VP39 123 368 IPR029063 -
Lele39g0383 368 PIRSF O-mtase 2 368 IPR016461 GO:0008168
Lele39g0383 368 Gene3D - 2 120 IPR036388 -
Lele39g0383 368 SUPERFAMILY "Winged helix" DNA-binding domain 19 123 IPR036390 -
Lele39g0383 368 Pfam O-methyltransferase domain 145 350 IPR001077 GO:0008171
Lele39g0383 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 365 IPR029063 -
Lele39g0383 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 26 368 IPR016461 GO:0008168
Lele39g0383 368 PANTHER O-METHYLTRANSFERASE 29 349 IPR016461 GO:0008168
Lele39g0383 368 Pfam Dimerisation domain 36 87 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0383 Lele-ChrLele39 2697272 2699763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0383 18 368 Monolignol Biosynthesis Gene Families AT5G54160 47.592 9.51e-114 333