Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele39g0382 | ATGGACCCTCTGGACCTAAAGGAACTCAAGAGAGTCAAGTCCAACCTGGTTATCTCCGAAAATTGTTACCATCTTCTGCTCCAATGGATACTTCAAGATTGGAGTGACGAGCAATGCGTGAAGCTGTTAAAGAACTGCTATGATGCCACTCCCAAGAATGGGAAACTGATAGTGGTGCATGCTGTTTTGGACACTGAACCAGATGCTTCTGCTACTACTAAGATTAACGACCAATTTGATGTTATCTTAAGGACTTATACAGGTGGCAGAGAGAGAACTAAGCAGGAGTACATGAATTTGATTAAATCTGCTGGGTTTAGTGGCATTAGATTTGAATGCCTTGTTTATGATGTGTGGGTTATGGAGATTTTTAAGTAG | 378 | 0.4127 | MDPLDLKELKRVKSNLVISENCYHLLLQWILQDWSDEQCVKLLKNCYDATPKNGKLIVVHAVLDTEPDASATTKINDQFDVILRTYTGGRERTKQEYMNLIKSAGFSGIRFECLVYDVWVMEIFK | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele39g0382 | 125 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 26 | 122 | IPR029063 | - | |
| Lele39g0382 | 125 | Pfam | O-methyltransferase domain | 25 | 107 | IPR001077 | GO:0008171 | |
| Lele39g0382 | 125 | Gene3D | Vaccinia Virus protein VP39 | 25 | 114 | IPR029063 | - | |
| Lele39g0382 | 125 | ProSiteProfiles | SAM-dependent O-methyltransferase class II-type profile. | 1 | 125 | IPR016461 | GO:0008168 | |
| Lele39g0382 | 125 | PANTHER | O-METHYLTRANSFERASE | 25 | 106 | IPR016461 | GO:0008168 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele39g0382 | Lele-ChrLele39 | 2687344 | 2688878 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele39g0382 | 25 | 125 | Monolignol Biosynthesis Gene Families | AT5G54160 | 42.157 | 5.00e-26 | 98.2 |