Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0355 ATGTCACTACGCTTTCCAAGCACCACACCCTTTTTTGGTCTTCATCCATCTTCGTCTTCTACTCCCTCTTCTGTTTGTCAGCTTCATCAGCTGACAAACAGTGTGGTCCGCTTCTTCCATTCTGTCTTACTATTTGATACTGTTTTCAGAGCTATCAGCCAAACCAATCAGCTCCTAAAAGATGCTCTCGTGACAGAGCTTCCTGGATTATCAATGGCACTACGCATTCCAAGCACCAAACCCTTTTTTTTTCTTCTTCAGCGCATTTTATCAAACAGTATGGCTACGAGAAACAGTGTGGTCTGCTTCGTCTATATTGTCTTCCTTAACATTTTCTTGAGTTCTCTGCCAACCCAATCAGCCCCTGAAGCTGCTCTCGTCACAGAGCTTCCTGGATTCAATGGCACTTTACCTTCAAAGCACTATGCCGGCTACGTGCCTGTGGATGAAAGTCAAGGGAGGAACCTGTATTACTACTTTGTTGAATCAGAAGGAAATCCATCTGAGGATCCTGTGGTTTTATGGCTCAACGGTGGACCAGGGTGCTCTAGCTTCGACGGCTTCGTGTATGAGCATGGTCCTTTCAATTTTGAAAAGGCCAAAACCAAGGGATCCTTGCCCTCATTGCACCTCAATCCTTATAGCTGGTCAAAGGTTTCCAACATTATATATTTGGATTCTCCAGCTGGTGTGGGGTTTTCTTACTCTCAAAATACATCTGATTACCCAACTGGAGACCTAAGGACTGCTTCAGAGTCACACACCTTTCTCCTTAATTGGTTTGAACTCTATCCTGAGTTCCTTTCTAACCCATTCTTCATCGCTGGAGAGTCGTATGCTGGAATTTATGTACCTACGCTGGCTTATGAAGGGTTTTTGGTAGGAAATGGCGTTGCAGATGATGAAATTGATGGCAATGCTCTTATTCCATTTACACATGGGATGGGTCTTATCTCAGATGAATTGTATGAGGAGACTAGAAATGTGTGCAATGCTAATTACTATGTTCCAGTGAATGAAGAATGTGAAAAATTGATAGCCAAAGTTAATGAGTTGATTCATGATCTAAACGTATACAACATTCTAGAACCATGCTATCATGGGAATGAGACAGTAGAGGCTACAACATCCTACATTAGGTTGCCATCCAGTTTCCGGCAGTTAGGCGCCTTGACCGGGAGACCTCTACTGGTGAGAAAAAGGATGTTTGGTCGTGCTTGGCCCCTTAGAGCTCCCGTGAAAGATGGAATTGTGCCAACTTGGCCAGAACTTAGCAGTAGCAGTGGCGGCACCATTGTTCCATGCACTGATGATGAGGTTGCAACCATATGGTTGAACGATGAGACAGTTAGGAAAGCAATTCACACTGCATCGGAAAGTGATGTGGAGACTTGGATTATATGCACGAAAGTTATTAGTCCTTTCGTTCATGATTCTGGGAGCATGCTCGCATACCACTGGAGCTTGACATCCAAAGGATATCGAGCACTTATATACAGTTATATACAAGGGTATGATAAAAATCTCACCTTTATGACCATAAAGGGAGCTGGACACACTGTTCCAGAATATAAGCCACAAGAGTCACTGTATTTCTATAAGCAATTTCTTGATGGATCGCCAATATGA 1629 0.434 MSLRFPSTTPFFGLHPSSSSTPSSVCQLHQLTNSVVRFFHSVLLFDTVFRAISQTNQLLKDALVTELPGLSMALRIPSTKPFFFLLQRILSNSMATRNSVVCFVYIVFLNIFLSSLPTQSAPEAALVTELPGFNGTLPSKHYAGYVPVDESQGRNLYYYFVESEGNPSEDPVVLWLNGGPGCSSFDGFVYEHGPFNFEKAKTKGSLPSLHLNPYSWSKVSNIIYLDSPAGVGFSYSQNTSDYPTGDLRTASESHTFLLNWFELYPEFLSNPFFIAGESYAGIYVPTLAYEGFLVGNGVADDEIDGNALIPFTHGMGLISDELYEETRNVCNANYYVPVNEECEKLIAKVNELIHDLNVYNILEPCYHGNETVEATTSYIRLPSSFRQLGALTGRPLLVRKRMFGRAWPLRAPVKDGIVPTWPELSSSSGGTIVPCTDDEVATIWLNDETVRKAIHTASESDVETWIICTKVISPFVHDSGSMLAYHWSLTSKGYRALIYSYIQGYDKNLTFMTIKGAGHTVPEYKPQESLYFYKQFLDGSPI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0355 542 FunFam Carboxypeptidase 120 388 - -
Lele39g0355 542 SUPERFAMILY alpha/beta-Hydrolases 127 541 IPR029058 -
Lele39g0355 542 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 127 526 IPR001563 GO:0004185|GO:0006508
Lele39g0355 542 PRINTS Carboxypeptidase C serine protease (S10) family signature 212 224 IPR001563 GO:0004185|GO:0006508
Lele39g0355 542 PRINTS Carboxypeptidase C serine protease (S10) family signature 225 235 IPR001563 GO:0004185|GO:0006508
Lele39g0355 542 PRINTS Carboxypeptidase C serine protease (S10) family signature 260 285 IPR001563 GO:0004185|GO:0006508
Lele39g0355 542 PRINTS Carboxypeptidase C serine protease (S10) family signature 509 522 IPR001563 GO:0004185|GO:0006508
Lele39g0355 542 Gene3D alpha/beta hydrolase 120 377 IPR029058 -
Lele39g0355 542 ProSitePatterns Serine carboxypeptidases, serine active site. 274 281 IPR018202 GO:0004185
Lele39g0355 542 Gene3D - 502 542 - -
Lele39g0355 542 Gene3D - 432 501 - -
Lele39g0355 542 Pfam Serine carboxypeptidase 501 539 IPR001563 GO:0004185|GO:0006508
Lele39g0355 542 Pfam Serine carboxypeptidase 131 500 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0355 Lele-ChrLele39 2503661 2508277 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0355 440 542 Calmodulin-binding Proteins AT2G22960 29.787 1.19e-10 58.9