Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0327 ATGATCCGAATAACTTATATGATCCAATTTGATGCAAAGCCCAATACCTATCTGTTTGCAGAACCTCGCAGCGAGACGTTCTGCGGTACAAGTGGAGGCAAAATGGCAGTGCCTTTGATTAGCAAGAAAATTGTTAAGAAGCGTGTCAAGAAGTTCAAGAGGCCTCAAAGTGACAGGAAAATCTCTGTCAAGACAAACTGGCGAAGGCCGAAGGGTATTGATTCCCGTGTGAGGAGAAAGTTTAAGGGATGTACATTGATGCCAAATATCGGTTATGGTTCGGACAAGAAGACCCGCCACTATCTCCCCAATGGTTTCAAGAAATTTGTTGTGCACAATGCCCAGGAGCTGGAACTCCTGATGATGCACAACAGGAATTACTGTGCCGAGATAGCACACAACGTGTCTACCCGTAAGAGGAAGGAGATTGTCGAGCGAGCGGCTCAGTTGGATGTTGTTGTTACCAACAGACTGGCCAGGTTGCGTAGCCAGGAGGACGAGTAA 504 0.4683 MIRITYMIQFDAKPNTYLFAEPRSETFCGTSGGKMAVPLISKKIVKKRVKKFKRPQSDRKISVKTNWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNAQELELLMMHNRNYCAEIAHNVSTRKRKEIVERAAQLDVVVTNRLARLRSQEDE 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0327 167 CDD Ribosomal_L32_L32e 56 156 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele39g0327 167 SUPERFAMILY Ribosomal protein L32e 34 165 IPR036351 -
Lele39g0327 167 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 35 167 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele39g0327 167 Pfam Ribosomal protein L32 50 156 IPR001515 GO:0003735|GO:0005840|GO:0006412
Lele39g0327 167 SMART Ribosomal_L32e_2 49 156 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0327 Lele-ChrLele39 2311146 2313008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0327 35 167 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 86.466 3.31e-85 244