Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0326 ATGTCCTCCATGGACATCGGCGATGAGAGTCGCCACCGTCACCGCACGTTCCCGGAGTTAGATTTTCAGGACATGAAGGTGATCTCCGCCGTAGGCCGCGGTGCCAAGGGCGTTGTGTTCGCGGCCACGAGAAATGACGATGTGTCTGGTGAGTATTTCGCTTTGAAAGTGATCTCCAAGGCTTTGATTCAAAAGAAAGCGAAGGCAGTGAACAACGGTGACAGCGAGTGCAAGAGGGTGTCGTTTGAACAGCATGTGCTGCGTCGTTTTGATCACCCTCTCTTGCCTAGGTTGCGAGGGGTTCTGGAAACCGACAAGATTATTGGGTACGCCATCGATTATTGCCCCGGCGGCAATCTCCATTCTCTCCGGAAAAAGCAGACCGAGAAGATGTTCTCCGATGATAGCATAAGATTTTATGCTGTGGAATTGGTCCTTGCATTGGAGTATCTGCATAATTTGGGAATAGTTTACAGAGATTTGAAGCCAGAGAACATACTGATCCAAGAAAATGGTCACATAATGCTCGTCGACTTCGATCTATCCAAGAAACTAATCCTGAAATCTCCAAAATCCCAGAGTAGTTCATCGTCGCCGATTTCCCACTCGTCAAAGACGACAGCGATGAAGGACCTACGGAAGAAACGCTTCTTCCGATTCTACAGTTGCTCCGTGCCAACACCCTCATCGTACGAACCAGAAGCCTCACCGGAATTCCACTGTCCGCGGCGGAGCGAGTCAGACTCGGTGGAGAAATCGAATTCGTTCGTTGGAACGGAGGAATACGTAGCACCCGAAGTAATCACGGGGAAGGGACATAACTTCGGAGTCGATTGGTGGTCGCTCGGAGTCGTTTTATACGAGATGCTGTACGGAACGACGCCGTTTAGGGGAGAGAACAGGAAAGAAACGTTCTATAGGATTATGACGAAGGAACCAGAGTTAACCGGAGAGAGGACGCAGTTGAGGGATTTGATCGCGAAGTTGCTAGAGAAGGATCGTGACCGTCGGATCGACGTGGAAGGGATCAAGGGCCACGATTTCTTCCGAGGGGTTCAGTGGGACTCTGTTTTGCAGGTAGCACGGCCGCCGTATATTCCGTTGAATGAAGTAGGGGACACAAATGGGTTAAACAAAAAGCAAGTGGAGATATTTGTCCATGAGGTATTTTTTGGGAAGGAATGTGAGGAAGGGAAGGGGACTAAAGAAGAAGAAAATAATAACGATGATGACGATAGAGAGAATAACAAGAACGTGTGGGTAGATAAGTTGAGTAATCAGAGTCCCACAGAGAATGAGAATTTTTTAATTTTTTGA 1317 0.4829 MSSMDIGDESRHRHRTFPELDFQDMKVISAVGRGAKGVVFAATRNDDVSGEYFALKVISKALIQKKAKAVNNGDSECKRVSFEQHVLRRFDHPLLPRLRGVLETDKIIGYAIDYCPGGNLHSLRKKQTEKMFSDDSIRFYAVELVLALEYLHNLGIVYRDLKPENILIQENGHIMLVDFDLSKKLILKSPKSQSSSSSPISHSSKTTAMKDLRKKRFFRFYSCSVPTPSSYEPEASPEFHCPRRSESDSVEKSNSFVGTEEYVAPEVITGKGHNFGVDWWSLGVVLYEMLYGTTPFRGENRKETFYRIMTKEPELTGERTQLRDLIAKLLEKDRDRRIDVEGIKGHDFFRGVQWDSVLQVARPPYIPLNEVGDTNGLNKKQVEIFVHEVFFGKECEEGKGTKEEENNNDDDDRENNKNVWVDKLSNQSPTENENFLIF 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0326 438 FunFam Serine/threonine-protein kinase OXI1 119 186 - -
Lele39g0326 438 FunFam Serine/threonine-protein kinase OXI1 251 368 - -
Lele39g0326 438 SMART serkin_6 25 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0326 438 MobiDBLite consensus disorder prediction 397 419 - -
Lele39g0326 438 Pfam Protein kinase domain 27 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0326 438 Pfam Protein kinase domain 251 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0326 438 PANTHER FLIPPASE KINASE 1-RELATED 18 375 - -
Lele39g0326 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Lele39g0326 438 Gene3D Transferase(Phosphotransferase) domain 1 249 368 - -
Lele39g0326 438 Gene3D Transferase(Phosphotransferase) domain 1 119 189 - -
Lele39g0326 438 SUPERFAMILY Protein kinase-like (PK-like) 26 374 IPR011009 -
Lele39g0326 438 MobiDBLite consensus disorder prediction 232 252 - -
Lele39g0326 438 MobiDBLite consensus disorder prediction 397 431 - -
Lele39g0326 438 Gene3D Phosphorylase Kinase; domain 1 24 118 - -
Lele39g0326 438 ProSiteProfiles Protein kinase domain profile. 25 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0326 Lele-ChrLele39 2302264 2303818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0326 7 438 AGC Kinase Gene Family AT3G25250 57.631 2.93e-157 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele39g0326 Pkinase 3.2e-32 CL0016