Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0320 ATGGAAAACGAATTCTGCCTCAACGCCGGTTCCCTTCACTTCGAACCACCTCCTCCTTCTTCAATGCCCACGTGGCAGTCGCTCTCATCCGCCATGGATGTTCAAGTTGAAGCTGCTGTCCTCAATTGCGCTTCCGAGCAACCGCAAGATTGCTTTTACAACAACACCAAATGGGATAAGTCAACGGATCATCATGGTCTTCAATTTGATTCTGCTCTGAGCTCTATGGCTTCTTCGCCGGCAGCGTCAAATTCCAATGTTATGCCCAATAATGAGAATTTCATGATCGGGGAATTGATAGGGAAATTGGGGAACATTGGTGCTTCTCCTTACATTAATGGCGGCAATAGCACTGATACTTCGTGTTACAGCACTCCCTTGAGCTCGCCTCCAAAGATGAACATGATGAACCAGCTGGTGAAAGAGAACTTGCCCAGTTTAGGGAAATCGATGGTTTTGAATTCTAATGTTGCTGAATTCTCATCTGATCCTGGTTTTGCAGAGAGAGCTGCCAAGTTTTCTTGCTTTGGAAGCAGGAGCTTCAATGGCAGAACATACCAACTAAGCATGAACAACGGTCAATTGTCTCTAAGATCTACTCTATCAATGGAAAATGAGAAGTTCGCTCGAGTTTGTAGTAGTCCTGCTCTGAAAGCACTTGGTGGATCTCAAACGGAAGTGGCTAATTCCCAAGAGGAATCAACAATCTCTGAGCAAACCCCAAATGGGGAAAATGGGGGGAATGTGAAATCAAGGAAAAGAAAAGCTTCTTCCAAGGGAACTAATACCAGAGAAATTTCAACTTCAACCAATCCTACTCCCAAGGCTAATGAAACCAATGAAGATTCAAATGAAAAGCGCAGCAAGCCAAACGAAGGTGAAGGGAATGAAAATGGAACTGATCTGAAGGTAGAAGAAGACTCAAAAGGGGGTACTAGCAATGGAGGAGATGAGAAACAGACCAAGAGTAATAACTCATCAAAACCTCCTGAACCTCCAAAAGATTACATTCATGTCAGAGCAAGAAGAGGCCAAGCCACTGACAGCCACAGTCTTGCAGAAAGAGTCCGGAGGGAAAAAATCAGCGAGAGGATGAAGCTTCTGCAAGATATTGTACCAGGTTGCAATAAGGTCACTGGTAAAGCACTTATGCTTGATGAAATCATAAACTATGTGCAGTCATTGCAGCGTCAAGTTGAGATGTTTCAATCAAATATCTCTTTGGCAAACACAACATTCCCTCTAGATTCCTCAGCACAAGCCTTTTATGGGCAACAACACACTCAGCAAAACCCAGGAATCCACAATAACATTCTTAATGGTGTTGTGTCCCACAGCACAGTAGATCCATTAGAAGCTGCTTCTCTGTGCCAAAACATGGGCATGCAATTACCTCCTCTTAATGGCTTTAATGAAGGTGGTTCTTCTCAGTTTCCAGTGGGATTCTGTGAGGATGACCTTCACAGCATTGTTCAGATGGGATTTAGGCAAAGTGGACAAGGAAAATCACCCAGTGATTACCAAAACTTCAACGGTTCAAATCAAGTCACCCATCTGAAAGTTGAACCCTAA 1572 0.4377 MENEFCLNAGSLHFEPPPPSSMPTWQSLSSAMDVQVEAAVLNCASEQPQDCFYNNTKWDKSTDHHGLQFDSALSSMASSPAASNSNVMPNNENFMIGELIGKLGNIGASPYINGGNSTDTSCYSTPLSSPPKMNMMNQLVKENLPSLGKSMVLNSNVAEFSSDPGFAERAAKFSCFGSRSFNGRTYQLSMNNGQLSLRSTLSMENEKFARVCSSPALKALGGSQTEVANSQEESTISEQTPNGENGGNVKSRKRKASSKGTNTREISTSTNPTPKANETNEDSNEKRSKPNEGEGNENGTDLKVEEDSKGGTSNGGDEKQTKSNNSSKPPEPPKDYIHVRARRGQATDSHSLAERVRREKISERMKLLQDIVPGCNKVTGKALMLDEIINYVQSLQRQVEMFQSNISLANTTFPLDSSAQAFYGQQHTQQNPGIHNNILNGVVSHSTVDPLEAASLCQNMGMQLPPLNGFNEGGSSQFPVGFCEDDLHSIVQMGFRQSGQGKSPSDYQNFNGSNQVTHLKVEP 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0320 523 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 343 408 IPR036638 GO:0046983
Lele39g0320 523 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 232 441 IPR024097 GO:0006355
Lele39g0320 523 MobiDBLite consensus disorder prediction 279 313 - -
Lele39g0320 523 CDD bHLH_AtBPE_like 335 419 - -
Lele39g0320 523 MobiDBLite consensus disorder prediction 314 330 - -
Lele39g0320 523 FunFam Basic helix-loop-helix transcription factor 342 414 - -
Lele39g0320 523 Gene3D - 342 413 IPR036638 GO:0046983
Lele39g0320 523 MobiDBLite consensus disorder prediction 261 278 - -
Lele39g0320 523 MobiDBLite consensus disorder prediction 222 247 - -
Lele39g0320 523 MobiDBLite consensus disorder prediction 222 336 - -
Lele39g0320 523 SMART finulus 351 401 IPR011598 GO:0046983
Lele39g0320 523 MobiDBLite consensus disorder prediction 497 523 - -
Lele39g0320 523 Pfam Helix-loop-helix DNA-binding domain 349 396 IPR011598 GO:0046983
Lele39g0320 523 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 345 395 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0320 Lele-ChrLele39 2229875 2232386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0320 1 475 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 43.110 8.28e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele39g0320 HLH 5e-06 No_clan