Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0316 ATGTTTGCGCAGTTGTTCGATATTCTTGGTATTTTCTATTCCGTTGATTGGTTTCGTTTTTTCCTTCCTGGATTAGCTTCTGCTAAGAAGGCCGCTGATGTAACAGAGTTACGGATTGGAGTGAAGGCGAATGCCTGCACAAACCAAAATCATGTGAAGTTCAGGCACATAAAGGGAAAACTTACTGATGGAACTGTTTTTGACTCTAGCTTTGAAAGAGATAGCCCAATTGAATTTGAGCTTGGTACTGGACAAGTGATCAAAGGGTGGGACCAAGGATTATTGGGAATGTGTCTTGGTGAGAAGCGCAAGTTACAAATACCAGCAAAACTTGGCTATGGAGAGATGGGTTCTCCTCCAACTATTCCTGGTGGTGCAACGCTCATTTTTGACACTGAACTCGTAGGGGTAAATGGCAAAACTTTGACTGAAGAAAAATCAGACTCTGAGCTTTAG 456 0.4232 MFAQLFDILGIFYSVDWFRFFLPGLASAKKAADVTELRIGVKANACTNQNHVKFRHIKGKLTDGTVFDSSFERDSPIEFELGTGQVIKGWDQGLLGMCLGEKRKLQIPAKLGYGEMGSPPTIPGGATLIFDTELVGVNGKTLTEEKSDSEL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0316 151 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 138 IPR001179 GO:0003755
Lele39g0316 151 SUPERFAMILY FKBP-like 55 143 - -
Lele39g0316 151 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 48 135 IPR001179 GO:0003755
Lele39g0316 151 FunFam Peptidyl-prolyl cis-trans isomerase 27 139 - -
Lele39g0316 151 Gene3D - 28 149 IPR046357 GO:0003755
Lele39g0316 151 PANTHER PEPTIDYLPROLYL ISOMERASE 26 140 IPR044609 GO:0000413|GO:0003755|GO:0061077
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0316 Lele-ChrLele39 2198531 2201823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0316 56 135 Calmodulin-binding Proteins AT3G25230 60.000 6.36e-25 97.4