Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0313 ATGGAAAGATATAAAATTTTGAGAGAGCTCGGAGATGGTTCTTGCGGTCATGTATATAAGGCCCGTGATTTGAGGACATACGAGATTGTTGCTGTCAAAAAGTTGAAAAGAAAGTTCTCTTTCTGGGAAGAATTTACAAATTTAAGAGAAGTCAAGGCCCTTCGGAAAATGAATCACCCAAATATCATAAAGTTGAAAGAGGTTATCAGGGAAAATAATGAACTGTTTTTCATATTTGAATACATGGAGTATAATCTTTATCAATTAATAAAAGACAGACAAAAGCCCTTTTCAGAGGAAGACATACGGTCTTTCATGAAGCAAGTGCTTAAAGGTCTTAGTCACATGCACAAGAAAGGATTCTTTCACCGTGACATGAAACCAGAGAATTTGCTGGTGACAAATGATGTTCTTAAAATTGCTGATTTTGGACTGGCCAGAGAAGTATCATCGATGCCTCCTTATACTCAATATGTTTCCACACGGTGGTATCGAGCTCCAGAAGTTTTGTTACAGTCTCCATGTTATACTCCTGCTGTTGATATGTGGGCAGCTGGCGCTATATTAGCTGAGCTTTTCACCTTGAACCCCATATTCCCTGGTGAAAGTGAAATAGATCAACTGTACAAGATATATTGTGTTCTTGGTACACCAGATTTGACTTCTTTCCCTGTGGGAGCAAACAACATGAGGCTATTAGACATTGTTGGTCATGAAGTGGTTCCGCCTTCAAAGCTTTCTGATATAATTCCTAACGCTAGCTCAGAAGCTATAGATTTGATCACGCAATTATTATCATGGGACCCATCAAGAAGGCCAGATGCAGATCATGCGCTGCAGCATCCTTTTTTCCATGTGAGTACATGGGTTCCTTGTCCAATCCGTGATCCACTTGAACTAAGGCTGAGTAGCAAGAGGGCAAAACCAAATCTGGAGCTTAAGTTGCAGGATTTTGGCCCTGACCCCGATGACTGTTTTCTTGGCTTAACGTTAGCTGTAAAGCCCAGCATTTCAGATTTGGATGCGACCCACAACGTTTCGCGAGGCATGGGAGAGAATGTGCTGTTCTGTTCTGACTTCAGTGATCATTCAGACCGATCAGTTTTTTGGACATTTTTGTCTCCGGATCAAAATGGAGTGCACTCCTCAGCAGAGACTTCGTTGTCATTGTCATTTGGTTCAATTCAGCACCAACCCATTGGAGTTCCACAGTCAACGACAGGATTCTCCTTTCAGCCTTTGCAGCCTAACATTTTAACTCCTCCATTTTTGGCTCTGTCTTCTCCTTTCCAGAGTGGGCACTGCCTTTAG 1311 0.418 MERYKILRELGDGSCGHVYKARDLRTYEIVAVKKLKRKFSFWEEFTNLREVKALRKMNHPNIIKLKEVIRENNELFFIFEYMEYNLYQLIKDRQKPFSEEDIRSFMKQVLKGLSHMHKKGFFHRDMKPENLLVTNDVLKIADFGLAREVSSMPPYTQYVSTRWYRAPEVLLQSPCYTPAVDMWAAGAILAELFTLNPIFPGESEIDQLYKIYCVLGTPDLTSFPVGANNMRLLDIVGHEVVPPSKLSDIIPNASSEAIDLITQLLSWDPSRRPDADHALQHPFFHVSTWVPCPIRDPLELRLSSKRAKPNLELKLQDFGPDPDDCFLGLTLAVKPSISDLDATHNVSRGMGENVLFCSDFSDHSDRSVFWTFLSPDQNGVHSSAETSLSLSFGSIQHQPIGVPQSTTGFSFQPLQPNILTPPFLALSSPFQSGHCL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0313 436 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Lele39g0313 436 FunFam Serine/threonine-protein kinase MHK 1 83 - -
Lele39g0313 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lele39g0313 436 CDD STKc_MAK_like 4 284 - -
Lele39g0313 436 SMART serkin_6 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0313 436 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 308 - -
Lele39g0313 436 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Lele39g0313 436 SUPERFAMILY Protein kinase-like (PK-like) 1 285 IPR011009 -
Lele39g0313 436 FunFam Probable serine/threonine-protein kinase DDB_G0268078 83 291 - -
Lele39g0313 436 ProSiteProfiles Protein kinase domain profile. 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0313 436 Pfam Protein kinase domain 4 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0313 Lele-ChrLele39 2173861 2180519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0313 2 316 Core Cell Cycle Gene Families AT1G73690 40.752 4.01e-68 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lele39g0313 Pkinase 2.5e-76 CL0016