Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele39g0300 | ATGACATTTCTAGAGTTTCATAATTTCAATAGGGGAATATTGTTTGCAATGAGCACTCATGCAGTCAGGGGGCCTTCTGTCAGAAGTGGTCGAAGGAGGAAGACAGTTTTGAACTTGGACCTGAACTGTTTCCCACCAAATGAGAATCATGAACAGGGGGGACCTTCAACTCAATTGGTGCCTCAAGAAGTTCAAGCTGCCGAGCAAGTGCCCGTTGCACAACCTGTGATGATTGATGTGGAGGCCATTGAAGATGATGATGTTGTTGAATCCAGTCCCAGGGCTTTTGCTGAGGCTAAAATCAATTTGAGAAGAAATAGTAGGAGGACTATAGTTGATGTGGATTTAGAAGAGTGGACGGGAGGAATCAATAATGGTCGCAACAAGCGCAGAAGAATTTCCTCAAACCAAACGATTATTAACTGCGATCTTTATGTGAACCTGGAAGCCAGTAACAGTTCTATGAAGGATAATATAAGAATGCCACCAGAACCGCCAAAGGATCCTGTCTTTAACTGCCCAATTTGTATGGGCCCATTAGTAGAAGAAATGTCAACAAGATGTGGTCATATTTTTTGCAACAATTGCATTAGGGCGGCAATAAAAGTGCAAAGTAAATGCCCCACCTGCAGGAAAAAGGTTACTGTGAAAGAGCTTAGAAGGGTGTTTCTGCCAGCAACTAGTTGA | 687 | 0.4294 | MTFLEFHNFNRGILFAMSTHAVRGPSVRSGRRRKTVLNLDLNCFPPNENHEQGGPSTQLVPQEVQAAEQVPVAQPVMIDVEAIEDDDVVESSPRAFAEAKINLRRNSRRTIVDVDLEEWTGGINNGRNKRRRISSNQTIINCDLYVNLEASNSSMKDNIRMPPEPPKDPVFNCPICMGPLVEEMSTRCGHIFCNNCIRAAIKVQSKCPTCRKKVTVKELRRVFLPATS | 228 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele39g0300 | 228 | SUPERFAMILY | RING/U-box | 172 | 217 | - | - | |
Lele39g0300 | 228 | SMART | ring_2 | 173 | 210 | IPR001841 | - | |
Lele39g0300 | 228 | ProSiteProfiles | Zinc finger RING-type profile. | 173 | 211 | IPR001841 | - | |
Lele39g0300 | 228 | Pfam | Zinc finger, C3HC4 type (RING finger) | 172 | 210 | - | - | |
Lele39g0300 | 228 | PANTHER | ELFLESS, ISOFORM B | 21 | 228 | - | - | |
Lele39g0300 | 228 | ProSitePatterns | Zinc finger RING-type signature. | 188 | 197 | IPR017907 | - | |
Lele39g0300 | 228 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 145 | 227 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele39g0300 | Lele-ChrLele39 | 2059475 | 2064670 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele39g0300 | 17 | 227 | C3H Transcription Factor Family | AT5G48655 | 50.691 | 3.33e-48 | 155 |