Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0300 ATGACATTTCTAGAGTTTCATAATTTCAATAGGGGAATATTGTTTGCAATGAGCACTCATGCAGTCAGGGGGCCTTCTGTCAGAAGTGGTCGAAGGAGGAAGACAGTTTTGAACTTGGACCTGAACTGTTTCCCACCAAATGAGAATCATGAACAGGGGGGACCTTCAACTCAATTGGTGCCTCAAGAAGTTCAAGCTGCCGAGCAAGTGCCCGTTGCACAACCTGTGATGATTGATGTGGAGGCCATTGAAGATGATGATGTTGTTGAATCCAGTCCCAGGGCTTTTGCTGAGGCTAAAATCAATTTGAGAAGAAATAGTAGGAGGACTATAGTTGATGTGGATTTAGAAGAGTGGACGGGAGGAATCAATAATGGTCGCAACAAGCGCAGAAGAATTTCCTCAAACCAAACGATTATTAACTGCGATCTTTATGTGAACCTGGAAGCCAGTAACAGTTCTATGAAGGATAATATAAGAATGCCACCAGAACCGCCAAAGGATCCTGTCTTTAACTGCCCAATTTGTATGGGCCCATTAGTAGAAGAAATGTCAACAAGATGTGGTCATATTTTTTGCAACAATTGCATTAGGGCGGCAATAAAAGTGCAAAGTAAATGCCCCACCTGCAGGAAAAAGGTTACTGTGAAAGAGCTTAGAAGGGTGTTTCTGCCAGCAACTAGTTGA 687 0.4294 MTFLEFHNFNRGILFAMSTHAVRGPSVRSGRRRKTVLNLDLNCFPPNENHEQGGPSTQLVPQEVQAAEQVPVAQPVMIDVEAIEDDDVVESSPRAFAEAKINLRRNSRRTIVDVDLEEWTGGINNGRNKRRRISSNQTIINCDLYVNLEASNSSMKDNIRMPPEPPKDPVFNCPICMGPLVEEMSTRCGHIFCNNCIRAAIKVQSKCPTCRKKVTVKELRRVFLPATS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0300 228 SUPERFAMILY RING/U-box 172 217 - -
Lele39g0300 228 SMART ring_2 173 210 IPR001841 -
Lele39g0300 228 ProSiteProfiles Zinc finger RING-type profile. 173 211 IPR001841 -
Lele39g0300 228 Pfam Zinc finger, C3HC4 type (RING finger) 172 210 - -
Lele39g0300 228 PANTHER ELFLESS, ISOFORM B 21 228 - -
Lele39g0300 228 ProSitePatterns Zinc finger RING-type signature. 188 197 IPR017907 -
Lele39g0300 228 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 227 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0300 Lele-ChrLele39 2059475 2064670 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0300 17 227 C3H Transcription Factor Family AT5G48655 50.691 3.33e-48 155