Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0295 ATGGCTGTTCCAAAAGTGGACAAAAAGATGCTTGAAGAACTTGAAGCAATGGGATTTCCAAAGGCAAAGGCAACTCGAGCACTTCATTATTCTGGCAATACTAATGTAAGGGATGCTATAAATTGGATACTTGATCATGAGAATGATCCTGATATTGATGAGATTCCATTGGTTGATTCAGATATTGAGATTGATTCTTCTCAGTCATTCCCTATTACAGAAGAAATGCAAATCAAAGCAGAAAAGCTAAGGAAGATTTGTTCTTCTCATTCATCCCCTATTGCAGAAGAATTGCAAATCAAAGAACAGAATTGGGAACAATTGCATAAGATGAAAGAAGAGAGAGAAAAGAAATTGGAGATAGAAAGGGAAAAGGAGAGAATCCAAGCAGGTAAGAAACTCAATGAGATGAAGCGAATTGCTGAAGAAAATGAAAGGCAACGAAATATAGCCTTGCGGAAAGCAGAGAAAGAAGAAGAGAAAAGAGCAAGGGAAAAAGTCATACAGAAACTAGAACAGGATAAGATAAACAGAAGGTCTAAACTTGGGTTGCCCCTAGAAGGCCATGCAACCATGAAATCCTCAGCTACAACAGTACAGAAAGAACAAAATCCAAAGCCTGTTTATACTGTTACAAAAGTTGAGCTCTTGAGAGAATGTTTGAGGTCCCTCAAGCGTAACCACCAGAATGAGCATGCAAGAGTGAGAAGGGCCTTTGAAACACTCTTAATTTATGTTGGAAATGTTGTCAAGAATCCCAACCAGGAAAAATACAGGAAGATCCGATTGAGCAACCCATTATTCCAGGACAGAGTTGGGAGTTTGAATGGAGGTGTGGAATTTCTTGAACTATGTGGGTTTGCGAGAACAGGTGACTTTTTGTACCTTCCTGAGGAAAAGGTGGAAATAACATTACTAAATTCAGCTGGATTTGTGTTGAAGTCTGCTATTACCAATCCCTACTTTGGACTTTTTAGTACTCGCACATTGTTATAA 996 0.3865 MAVPKVDKKMLEELEAMGFPKAKATRALHYSGNTNVRDAINWILDHENDPDIDEIPLVDSDIEIDSSQSFPITEEMQIKAEKLRKICSSHSSPIAEELQIKEQNWEQLHKMKEEREKKLEIEREKERIQAGKKLNEMKRIAEENERQRNIALRKAEKEEEKRAREKVIQKLEQDKINRRSKLGLPLEGHATMKSSATTVQKEQNPKPVYTVTKVELLRECLRSLKRNHQNEHARVRRAFETLLIYVGNVVKNPNQEKYRKIRLSNPLFQDRVGSLNGGVEFLELCGFARTGDFLYLPEEKVEITLLNSAGFVLKSAITNPYFGLFSTRTLL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0295 331 CDD UBA_PUB_plant 6 53 - -
Lele39g0295 331 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 5 46 IPR015940 -
Lele39g0295 331 PANTHER F13M7.16 PROTEIN 1 324 - -
Lele39g0295 331 SMART PGNneu 237 298 - -
Lele39g0295 331 Pfam UBA/TS-N domain 7 43 IPR015940 -
Lele39g0295 331 SMART uba_6 7 45 IPR015940 -
Lele39g0295 331 Coils Coil 134 177 - -
Lele39g0295 331 SUPERFAMILY PUG domain-like 208 321 IPR036339 -
Lele39g0295 331 Gene3D - 7 53 - -
Lele39g0295 331 Pfam PUB domain 234 302 IPR018997 -
Lele39g0295 331 SUPERFAMILY UBA-like 5 57 IPR009060 GO:0005515
Lele39g0295 331 Coils Coil 95 131 - -
Lele39g0295 331 Gene3D - 218 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0295 Lele-ChrLele39 2022871 2025926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0295 1 325 C2H2 Transcription Factor Family AT1G04850 52.584 1.48e-93 279