Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0283 ATGCATGGCCACCAAGGTCCAGAACCAGCTGGATGCTTAGAGAGAGAGAGAGAGAGATATTGCGATATTGTGGTACAGCTTTGCCCAGACTTTCCCTTCTCCCTTGATCTTCGACCTCATTTAAAAATTCTGGGAAAGCTCTATTTCGTTTTGGCTGCAAGACCAATGTGCAAAACAAAGAAGAGTTCATGGGGCATAAAGCTATGGTGGGTGGTTGGGTTTGCAGGATGGGTGATTATCAAAGTGATCGAGGGTTTCGACAATGCCAGTGTGACAGATATGGATTATGTCAAGAGAAGGGGTTTCAATTACAGGCCCTTAATGGTGGGTCTCAATCTTATTAATGGAGCTGTTGCCAAAGGCGCAGCTGCTTCAGGAGGAGGCTGGTGTGGAAATATCAAAACTTGTCAGTACAGTAAGAGAACTCGTCATGGTTCTTCCAATTTCATGGAAAAGCAGATTCCATTTGTTGGAATATTGAGTAACAAAGCTGAAGAAAACCCTGATTTTTTCAACTGGAACAGAGTAAAAATTCGTTACTGTGATGGTTCATCCTTTAGTGGGGACAGTCAAAATAAAGCCGCAAATTTGTACTTCAGAGGACAACGCATCTGGGAAGCTGCTATGGAGGATTTAATGTCAAAGGGCATGCGCTACGCTAAACAGGCTCTTCTATCTGGATGTTCTGCTGGAGGTTTAGCATCTATACTTCATTGTGACGAATTTCAGGGACTGTTTCCTTCAACTACAAGAGTCAAATGCTTAAGCGATGCTGGATTGTTCCTTGATACTGTTGATGTATCTGGCAGTCGCACTTTGAGGAGGACATTCAGAGATGTGGTCGCCTTGCATATGAGGTTTGACCTCAGTTTCACACTTCAGAAATCTATGTCAATTTCATGGTTGGATGCTTCAGTGGGTTCACCTGATTGCTTGAGTATTGTTAGCAAGATGTATAGGGAAAACCAAGATATGCTGAAAATGGAATTTGGTCTGTATCTTTCGTGGCAGGGGGCGGCAAGGAGCCTTCCAAGGAGTTGTACCAGTCACTTCAATCCAACTTTGATTCAGGCCAGCATAGCGCCGCCGTCAGTGGATTGTCGGTGGAGTTGGGCTCAGTGCAGGAAAAATTATGCACGCTGCACTGCATCACAGATTCATTATCTTCAAGGATTCCGAAATGAAATGCTTACTTCTGTAAGTGGCTTTTCCAGGGCTCGCAAAAATGGATTGTTCATAAATTCATGTTTCGCGCATTGTCAGACCGAAAGACAGGATACTTGGTTTGCCTACAATTCTCCCCATATTGGAAACAGAGGGATTGCACAATCTGTTGGAAACTGGTTTTTTGACAGAGTTGGAATACAGGCCATTGGTTGTGCTTACCCTTGTGACAAAACCTGTCACAATTTGGTTTTTCAATGA 1425 0.4365 MHGHQGPEPAGCLERERERYCDIVVQLCPDFPFSLDLRPHLKILGKLYFVLAARPMCKTKKSSWGIKLWWVVGFAGWVIIKVIEGFDNASVTDMDYVKRRGFNYRPLMVGLNLINGAVAKGAAASGGGWCGNIKTCQYSKRTRHGSSNFMEKQIPFVGILSNKAEENPDFFNWNRVKIRYCDGSSFSGDSQNKAANLYFRGQRIWEAAMEDLMSKGMRYAKQALLSGCSAGGLASILHCDEFQGLFPSTTRVKCLSDAGLFLDTVDVSGSRTLRRTFRDVVALHMRFDLSFTLQKSMSISWLDASVGSPDCLSIVSKMYRENQDMLKMEFGLYLSWQGAARSLPRSCTSHFNPTLIQASIAPPSVDCRWSWAQCRKNYARCTASQIHYLQGFRNEMLTSVSGFSRARKNGLFINSCFAHCQTERQDTWFAYNSPHIGNRGIAQSVGNWFFDRVGIQAIGCAYPCDKTCHNLVFQ 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0283 474 Pfam Pectinacetylesterase 125 452 IPR004963 GO:0016787
Lele39g0283 474 PANTHER NOTUM-RELATED 125 470 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0283 Lele-ChrLele39 1930480 1935654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0283 108 474 Carbohydrate Esterase AT1G57590 54.082 7.42e-139 405