Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0268 ATGGTAACATACACCACGCATTTCCTCTCTCTCCAAGACATTGGCGGCAATAACATTGCTTCACAGAACTTCACCTTCCGGGATCTAGCGATGGCGACAAAGAACTTCAGGAAAGAAACCCCAATTGGAAAGGGTGTCTGTTCTTCTTTATTGGATGTAGCTGTGAAGCAACTTGATAGGAATGGATCTCAAGGGAATAGAGAGTTCCTTGTTGAAGTGTTGATGTTGAGCCTCTTACATCATGAAAATCTAGTGAATCTAGTTGGTTATTGTGCCGATGGAGATCAGAGACTTTTGGTGGTGAATTTCAATGCATCGAGTACGGCGGCGTTTGATGAGTATAAGATTCGAGATGAAACAGGAACCGTTGACGAGATCACGCGTTCTGTATCTCCACGTGGCAATAGCCTACTGGGCGGGATGAGAAAATATACATACTCAGAGCTGAAACAAGCAACCAAAGGGTTCAAAGAAGAAATCGGAAGAGGAGCAGGTGGAACCGTGTACAAAGGAGTATTAGCAGATCAACGAGTCGCTGCAATAAAGAAGCTGAACTGTCAGAACAACATTATTGGAGGCAAACAAGAAGAAGGAGAATTCATGGCTGAAGTGAGCATAATCGGTAGGCTTAATCACATGAACTTGATCGAAATGTGGGGTTATTGTGCTGAGGGAAAGCATAGAATTTTGGTTTACGAATACATGGAGAAAGGAAGGAGTCCAATGACGATGGAGATTCATAGTGATGATGATGGAGAAGAGGCTCAGAATAATGTGAGGCTTGTGACGTGGGTGAGAGAGAAGAAGAAGAACGAAACGACGTCGTCAGGGTCTTGGGTAGACAAAATAATTGATCCGGCCATAGTATCAGAGTTGGAGGTTGAGAAGAAGCAGATGGAAACTTTGACAAGAGTGGCTTTGAAGTGCGTCCAAGAAGACAAAGATGCGAGGCCCACCATGAGCCAAGTTGTAGAAATGCTTCAGAGCCATGAAGAGTGA 999 0.4414 MVTYTTHFLSLQDIGGNNIASQNFTFRDLAMATKNFRKETPIGKGVCSSLLDVAVKQLDRNGSQGNREFLVEVLMLSLLHHENLVNLVGYCADGDQRLLVVNFNASSTAAFDEYKIRDETGTVDEITRSVSPRGNSLLGGMRKYTYSELKQATKGFKEEIGRGAGGTVYKGVLADQRVAAIKKLNCQNNIIGGKQEEGEFMAEVSIIGRLNHMNLIEMWGYCAEGKHRILVYEYMEKGRSPMTMEIHSDDDGEEAQNNVRLVTWVREKKKNETTSSGSWVDKIIDPAIVSELEVEKKQMETLTRVALKCVQEDKDARPTMSQVVEMLQSHEE 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0268 332 PANTHER OS07G0415500 PROTEIN 22 103 - -
Lele39g0268 332 FunFam S-receptor-like serine/threonine-protein kinase 125 234 - -
Lele39g0268 332 Pfam Protein kinase domain 157 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0268 332 Gene3D Phosphorylase Kinase; domain 1 13 103 - -
Lele39g0268 332 SMART tyrkin_6 156 327 IPR020635 GO:0004713|GO:0006468
Lele39g0268 332 Pfam Protein tyrosine and serine/threonine kinase 51 104 IPR001245 GO:0004672|GO:0006468
Lele39g0268 332 ProSitePatterns Protein kinases ATP-binding region signature. 160 183 IPR017441 GO:0005524
Lele39g0268 332 SUPERFAMILY Protein kinase-like (PK-like) 22 103 IPR011009 -
Lele39g0268 332 ProSiteProfiles Protein kinase domain profile. 154 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0268 332 Gene3D Transferase(Phosphotransferase) domain 1 231 332 - -
Lele39g0268 332 Gene3D Phosphorylase Kinase; domain 1 121 230 - -
Lele39g0268 332 SUPERFAMILY Protein kinase-like (PK-like) 138 238 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0268 Lele-ChrLele39 1832823 1840744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0268 17 327 Glycoside Hydrolase AT3G07070 33.134 1.52e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lele39g0268 Pkinase 3e-14 CL0016