Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0262 ATGAGAAGACAGGGAGGTTCATATTGTAGAATGAATGAGATTCTCGTTGTTGCTCTTGTTTTGTTGCAGATTTGTTCTCAAGTTGCAACTTCTGGTTCAGCTGTTGACTACCTTCCTGGTTTTGAAGGCCCTCTTCCTTTTCATCTTGAAACTGGGTATGTGGGAGTGGGAGAATCAGAAGGAGGAGGAGGACAAGTATTCTATTATTTCATTGAGTCAGAGAACAATCCACAAGAGGACCCTCTTATGCTTTGGCTCAGCGGTGGCCCTGGTTGCTCTTCATTCTCAGGCCTCATTTTTGAAATAGGTCCAATCGAATTCAAAGTTGAGAAATACAATGGTACCCTGCCCAATTTGATTTTGAGGCCACAAGCGTGGACAAAGGTATGCAGTATAATATTTGCAGATTTGCCTATTGGCACTGGCTTCTCTTATGCAAACGCCCCTTATGTTCAACGAGGTGATTGGAATTTAGTTAGGCATGCCTATCAATTTCTTAGAGAGTGGCTCTTCGATCACCCAAGATTTCTGTCAAATCAAGTTTATATTGGCGGCGACTCGTATTCTGGCATTCCTATTCCTGCTATTGTTCAAGAAATTTCAAATGGAAATGAAAAAGGTATCCAGCCATGGATAAATCTCCAGGGATATGTGCTAGGGAATCCCTTCACAACAATGAAAGAAAAAAATTATTTACCCTCATTTGCTCATGGAATGGCACTAATCTCCGATGAACTTTATATGAGTTATTCATATTTCCTCTGCTATGATTGGATTGAGGATGAAAAAGTTCAGGAGGCGCTGTATATTCGAAAGGGTACCATAAGGAATTGGCGACGTTGTGATCCCTCCAACTACAGTTACGAAATTGCTAACGCATTTTCATATCACGTAAATCTAAGTCAAAAGGGCTATCGATCTTTGATTTACAGTGGAGATCATGACCCAGCGGTTCCATTTATGTCGACTCAAGCATGGATCAGAGATTTAAACCACTCCATTCTTGAAGACTGGAGACCTTGGCTTGTCAATCGCCAGGTTTCAGGATATACGAGGATGTATTCGAATCAGATGACATTTGCCACTGTAAAGGGTGCAGGACATACGGCTCCTGAGTACAAACCTGAAGAATGTTTTGCAATGTTTAATAGGTGGATATCTAATAATTCCATGTAG 1176 0.4116 MRRQGGSYCRMNEILVVALVLLQICSQVATSGSAVDYLPGFEGPLPFHLETGYVGVGESEGGGGQVFYYFIESENNPQEDPLMLWLSGGPGCSSFSGLIFEIGPIEFKVEKYNGTLPNLILRPQAWTKVCSIIFADLPIGTGFSYANAPYVQRGDWNLVRHAYQFLREWLFDHPRFLSNQVYIGGDSYSGIPIPAIVQEISNGNEKGIQPWINLQGYVLGNPFTTMKEKNYLPSFAHGMALISDELYMSYSYFLCYDWIEDEKVQEALYIRKGTIRNWRRCDPSNYSYEIANAFSYHVNLSQKGYRSLIYSGDHDPAVPFMSTQAWIRDLNHSILEDWRPWLVNRQVSGYTRMYSNQMTFATVKGAGHTAPEYKPEECFAMFNRWISNNSM 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0262 391 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 256 375 IPR001563 GO:0004185|GO:0006508
Lele39g0262 391 FunFam Carboxypeptidase 294 388 - -
Lele39g0262 391 Pfam Serine carboxypeptidase 39 252 IPR001563 GO:0004185|GO:0006508
Lele39g0262 391 Gene3D alpha/beta hydrolase 42 251 IPR029058 -
Lele39g0262 391 Gene3D alpha/beta hydrolase 252 391 IPR029058 -
Lele39g0262 391 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 194 IPR001563 GO:0004185|GO:0006508
Lele39g0262 391 PRINTS Carboxypeptidase C serine protease (S10) family signature 358 371 IPR001563 GO:0004185|GO:0006508
Lele39g0262 391 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 145 IPR001563 GO:0004185|GO:0006508
Lele39g0262 391 PRINTS Carboxypeptidase C serine protease (S10) family signature 122 134 IPR001563 GO:0004185|GO:0006508
Lele39g0262 391 FunFam Serine carboxypeptidase-like 19 28 268 - -
Lele39g0262 391 FunFam Carboxypeptidase 247 390 - -
Lele39g0262 391 SUPERFAMILY alpha/beta-Hydrolases 35 388 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0262 Lele-ChrLele39 1784216 1791011 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0262 29 58 Calmodulin-binding Proteins AT2G22960 70.000 7.11e-08 50.4