Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0256 ATGGCGGTGACGAAGCTTTTCTCTCTCTACATTTTCATGTTCACCTTCTTATTCTGCAGCTACGACACCAACAAATCTAGTGCCTTTGCAGCCTCTTTTCCGCCTCCTTCTTCATCTTCTTCGGATGTCGAGCTTCTATTGGGTAAAATCAGAGCTACCCTTCAAGGTAGCGCCGATAACCTCGTTTTGTCTTCATGGAATTCCTCTATACCCCTTTGCCAATGGAGGGGACTCAAATGGGTTTTCTCAAATGGCTCTCCCCTGCCATGCAATGACTTGTCTTCACCGCAATGGTCCAATCTTTCTCTTTTCAGAGACCCCTCTTTACGTTTACTCTCTCTTCAGCTTCCTTCTGCGAATCTCTCTGGTTCGCTTCCTAGGGAACTTGCAGAGTTTCCAATGCTTCAGAGTCTCTATCTCAACATCAATTCGTTGAAAGGGACAATTCCTATTGAGCTTGGGTATGGTTCCTCACTCAACGATGTCATTTTGGATGACAATATGTTGAGTGGAGCTTTACCACCATCGATCTGGAATTTGTGTGATAAACTCGTTTCTCTTAGACTCCATGGCAACATGTTTTCCGGGTCTCTTCCTGAACCGGCATTGCCCGAATCTTCTTGCAATAATCTGCAATTTCTTGATTTAGGTAACAACAACTTTTCTGGGGGTTTTCCTGAATTCATCGCCGATTTTGGTGGGTTGAAACAGCTAGACTTGGGAAATAATATGTTTACGGGTTCAATTCCTCAGAGCTTAGCTGGGCTAAATAGGCTAGAGAAACTGAATCTTTCTCACAACAATTTTAGTGGGGTTTTGCCTACTTTTGGTGAATCATCGAAATTTGGTGTGGAGGTTTTTGAAGGGAATAACCCTGGCTTGTGTGGGTTACCTTTAAGAGCTTGTAATGGAACTCCTAGATTGAGCTCTGGTGCAGTTGCTGGTATAGTTATCACTCTCATGACTGGAGCTGTGGTTTTAGTTTCTTTGCTTATTGGGTATATGCAAAATAAGAGGAGGAAGGGTAAGGGAGATAGTGAAGATGAATTGGAGGAGGATGAAGATGATGATGATGAAGAAAATGGCGGTGGTAATAATGGTGCTATAGGTGGTGGTGAAGGGAAGCTTATGTTGTTCCAAGGTGGCGAGAATTTGTCGTTAGATGATGTGTTGAACGCGACGGGACAAGTTATGGAGAAGACATGTTATGGGACTGTTTATAAGGCAAAGCTTGCCGATGGAGGAACCATTGCTTTGAGGTTATTGAGGGAAGGTAGCTGCAACGATAGGGCATCGTGCTTGCCGGTTATTAAGCAATTGGGAAGGATTCGACATGAGAATTTGATTCCTTTGAGAGCCTTCTATCAGGGGAAAAGAGGAGAGAAGCTTCTTATTTATGACTATCTTCCACTCAGAACTCTTCATGATCTTTTACATGAAACTAAAGCTGGAAAACCGGTGTTAAACTGGGCCAGGCGGCACAAGATTGCATTAGGAATAGCCAGGGGACTAGCATATCTTCATACAGGACTTGATGTTCCAATCACTCATGGCAATGTACGATCTAAGAACGTGCTAGTTGATGAGTTCTTTGTTGCTAGGCTCACTGAGTTTGGGCTGGACAAGCTAATGATCCCTGCTGTAGCTGATGAAATGGTGGCTCTGGCGAAAGCAGATGGCTACAAGGCTCCAGAGCTTCAAAAGATGAAGAAATGCAACTCGAGGACTGATGTTTATGCATTCGGGATATTACTGCTGGAGATATTGATAGGGAAGAAACCGGGCAAGAATGGGAGGAGCGGGGAGGTGGTGGATCTGCCTTCGATGGTGAAAGTGGCGGTGTTGGAGGAGACAACAATGGAAGTGTTTGATGTGGAGCTTCTGAAAGGGATAAGGAATCCAATGGAAGATGGGTTGGTGCAAGCATTGAAGGTAGCAATGGGATGTTGTGCACCAGTGGCTTCAGTGAGACCAAGCATGGAGGAAGTTGTGAGACAGTTGGAAGAAAATAGGCCTAGGAATAGGTCTGCTTTATATAGCCCTACAGAAACAAGAAGTGGCAGTGGCACTCCTTTTTGA 2079 0.4454 MAVTKLFSLYIFMFTFLFCSYDTNKSSAFAASFPPPSSSSSDVELLLGKIRATLQGSADNLVLSSWNSSIPLCQWRGLKWVFSNGSPLPCNDLSSPQWSNLSLFRDPSLRLLSLQLPSANLSGSLPRELAEFPMLQSLYLNINSLKGTIPIELGYGSSLNDVILDDNMLSGALPPSIWNLCDKLVSLRLHGNMFSGSLPEPALPESSCNNLQFLDLGNNNFSGGFPEFIADFGGLKQLDLGNNMFTGSIPQSLAGLNRLEKLNLSHNNFSGVLPTFGESSKFGVEVFEGNNPGLCGLPLRACNGTPRLSSGAVAGIVITLMTGAVVLVSLLIGYMQNKRRKGKGDSEDELEEDEDDDDEENGGGNNGAIGGGEGKLMLFQGGENLSLDDVLNATGQVMEKTCYGTVYKAKLADGGTIALRLLREGSCNDRASCLPVIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHETKAGKPVLNWARRHKIALGIARGLAYLHTGLDVPITHGNVRSKNVLVDEFFVARLTEFGLDKLMIPAVADEMVALAKADGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKNGRSGEVVDLPSMVKVAVLEETTMEVFDVELLKGIRNPMEDGLVQALKVAMGCCAPVASVRPSMEEVVRQLEENRPRNRSALYSPTETRSGSGTPF 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0256 692 MobiDBLite consensus disorder prediction 668 692 - -
Lele39g0256 692 Gene3D Phosphorylase Kinase; domain 1 376 468 - -
Lele39g0256 692 FunFam Leucine-rich repeat receptor-like protein kinase 208 302 - -
Lele39g0256 692 MobiDBLite consensus disorder prediction 673 692 - -
Lele39g0256 692 SUPERFAMILY Protein kinase-like (PK-like) 401 668 IPR011009 -
Lele39g0256 692 Gene3D Ribonuclease Inhibitor 206 305 IPR032675 -
Lele39g0256 692 MobiDBLite consensus disorder prediction 348 362 - -
Lele39g0256 692 SUPERFAMILY L domain-like 75 301 - -
Lele39g0256 692 ProSiteProfiles Protein kinase domain profile. 392 692 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0256 692 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 200 - -
Lele39g0256 692 MobiDBLite consensus disorder prediction 340 371 - -
Lele39g0256 692 Gene3D Transferase(Phosphotransferase) domain 1 470 684 - -
Lele39g0256 692 Pfam Leucine rich repeat 210 269 IPR001611 GO:0005515
Lele39g0256 692 Pfam Protein tyrosine and serine/threonine kinase 396 667 IPR001245 GO:0004672|GO:0006468
Lele39g0256 692 Gene3D Ribonuclease Inhibitor 42 205 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0256 Lele-ChrLele39 1730724 1733527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0256 1 692 Receptor kinase-like Gene Family AT3G24660 71.717 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele39g0256 PK_Tyr_Ser-Thr 3e-25 CL0016