Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0251 ATGGATGGTGGGGTGAAACCGCAAGTGAAAGTGGGAGATTTCTTTGAAGAAGAAGAAGGAACAGTTATAGCGGCGGTTAAAGAGCGAGAGATCTGGCTTCAGAATAATAATTGCAGCCATGGCCATCACCAAGATGATGAAGATGATCTTCTTGCTGGTGTAATGGACGATGCTTCACTGTTCTATGCAGACGATGATTTCCCTTCTCTTCCAGATTTCTCATGCATGTCGTCTTCTTCATCTTCATCTTCACCACCAGTAGCCGCAGCAGTCAAAACTGTCGTCACGTGCGCTGAAGCCACCTCCTCCTCCAATGCGTCATCGTCCGATTGCGCGGCTTCATGGGCGAATCTCAAGTCCGATGCATCAGAGCCTACTGTCCAACTACCGCTACAGACACAGCCGCTGCTGCCGGCGTTATCCTCCACTGCTTCTATGGAGATCTCGAAGCCGTCAGATCATCAAGGCGGCGGAGATTGTCTGGGCATGATGGACACTTTCGGGAATATGGAACTCATGGAGAGCAACGAATTCTTCGATCCTTCATCAATCTTTGCAAACGAAGAGAATCTATTAGACGAATTGGCAGAGTTAGACCCGAATCGGCCGGAAGAGAGACATGCAAGTGGTGGAAATGGAATGATACTTCAGGAGGAACAGCAACGACAACAAACGCCGCCGTTGGCGGAGACGGCGACGGATGAAGAGATGAGTTCGTTGTTCTTGGAGTGGCTGAAGATGAACAAGGATAGCGTGTCGGCGAGTGATTTGAGGAGCGTGAGGTTGAAGAAGGCGACAGTAGAATGTGCAGCGAAGCGTCTTGGCGGAGGAAAAGAAGGCATGAAGCAATTACTGAAGCTGATTCTGGAATGGGTTCAGACCAGTCATCTTCAGAAGAAAAGGCGCATTGATCAATATCGTGATAACAGTGACAATCTTTTCGTGACTCATCAGTTTCAGGAGAATACCACAAACCCTAGCTCTAATCCCAACCACCAATCTTCATTTGGACAGGAATGGGTCTCTCAGCCTCCTTACGGGGTTGATCCGGCGGCCGCTCTAGCGGCGACCCCGCCATTTCCTCAACCGGTCCTGCAGGGAGATCTGTTTTCAAATGGAGTTTCAACTGAATTTCACGCGCTGGATTCTACCCATTCATGGCCTCATTCTCAGTTCACTACTCTTTACAACAGCCACCCATTCGGGGACACTAATCTACACCCGAAGACGACGGGGATGGCGGTGGCGGCTTTGGGCTGTTATGGGAATAATCATTTCCCGTATCAGTATTTTCATGGCGTCGGTGCAGATAGATTGGGTCCGTTGGCGACCAAAGAAGCGAGGAAGAAGAGAATGGCGAGGCAGAGACGGCATTTATCTCATCATCATCACAGGCATCACAATGTGCAAGACCAACAAAACCAGCAGAATCAAACCAGTGATTATTGCACTACTGCCACAGTTCCCCCTCATGCAAATCCACCTAACTGGTTGTATTGGCCGGCGCCTCCAGCAGCATCCAATGACGGAGCTACTTCTGTCGCGCCAACGGCTCAGGTGGAACCACCGTCAGGGAGAAAAGATGGGGATCGGACCACCATGCAATTCGACCACCAGAATTACCAACAAAGCCGGGTCTCATCAGATAAAAGACAACAGGGATGGAAGCCTGAGAAGAACTTGAAGTTCCTTCTGCAGAAGGTGTTGAAACAAAGCGACGTTGGTAATCTGGGGAGGATAGTGTTGCCAAAGAAAGAAGCCGAAACGCATTTGCCAGAACTGGAGGAAAGAGATGGGATTTCCATAGCAATGGAAGACATTGGAACTTGTCGTGTTTGGAACATGCGTTATAGATACTGGCCTAACAACAAAAGCAGGATGTATCTGCTCGAAAATACTGGAGATTTTGTGAGAGCCAACGGACTTCAAGAAGGAGACTTCATAGTGATATATTCAGATGTCAAATCTGGCAAATATATGATAAGAGGAGTGAAGGTAAGGCAAGCAGGGGCGAAGCTTGAGGGGAAGAAAGCAGGAAAATACCAGAAGGCTAATGGATCTGATAATCCGTGTTCTTCACCAAACAAGAATGAGAGAAAGCAATAA 2106 0.4848 MDGGVKPQVKVGDFFEEEEGTVIAAVKEREIWLQNNNCSHGHHQDDEDDLLAGVMDDASLFYADDDFPSLPDFSCMSSSSSSSSPPVAAAVKTVVTCAEATSSSNASSSDCAASWANLKSDASEPTVQLPLQTQPLLPALSSTASMEISKPSDHQGGGDCLGMMDTFGNMELMESNEFFDPSSIFANEENLLDELAELDPNRPEERHASGGNGMILQEEQQRQQTPPLAETATDEEMSSLFLEWLKMNKDSVSASDLRSVRLKKATVECAAKRLGGGKEGMKQLLKLILEWVQTSHLQKKRRIDQYRDNSDNLFVTHQFQENTTNPSSNPNHQSSFGQEWVSQPPYGVDPAAALAATPPFPQPVLQGDLFSNGVSTEFHALDSTHSWPHSQFTTLYNSHPFGDTNLHPKTTGMAVAALGCYGNNHFPYQYFHGVGADRLGPLATKEARKKRMARQRRHLSHHHHRHHNVQDQQNQQNQTSDYCTTATVPPHANPPNWLYWPAPPAASNDGATSVAPTAQVEPPSGRKDGDRTTMQFDHQNYQQSRVSSDKRQQGWKPEKNLKFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEERDGISIAMEDIGTCRVWNMRYRYWPNNKSRMYLLENTGDFVRANGLQEGDFIVIYSDVKSGKYMIRGVKVRQAGAKLEGKKAGKYQKANGSDNPCSSPNKNERKQ 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0251 701 CDD BfiI_C_EcoRII_N_B3 563 664 - -
Lele39g0251 701 FunFam B3 domain-containing transcription factor FUS3 561 675 - -
Lele39g0251 701 ProSiteProfiles B3 DNA-binding domain profile. 565 667 IPR003340 GO:0003677
Lele39g0251 701 SMART B3_2 565 667 IPR003340 GO:0003677
Lele39g0251 701 SUPERFAMILY DNA-binding pseudobarrel domain 564 661 IPR015300 -
Lele39g0251 701 Gene3D - 556 671 IPR015300 -
Lele39g0251 701 MobiDBLite consensus disorder prediction 321 341 - -
Lele39g0251 701 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 237 671 IPR044800 GO:0003700
Lele39g0251 701 MobiDBLite consensus disorder prediction 471 491 - -
Lele39g0251 701 Pfam B3 DNA binding domain 566 662 IPR003340 GO:0003677
Lele39g0251 701 MobiDBLite consensus disorder prediction 446 532 - -
Lele39g0251 701 MobiDBLite consensus disorder prediction 449 468 - -
Lele39g0251 701 MobiDBLite consensus disorder prediction 675 701 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0251 Lele-ChrLele39 1692051 1694527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0251 29 693 B3 DNA Binding Superfamily AT3G24650 46.365 4.23e-153 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele39g0251 B3 2.7e-17 CL0405