Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0238 ATGTCAAGAGCAGGGTCATCAAGATGGAGTCCAACCACAGAACAACTGATGATTCTGGAGGAACTGTATAGGAGTGGGATTAGAACTCCTAGTGCTTCCCAAATTCAACATATAACAACTCACCTTTGTTTCTATGGTAGGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAATCACAAGGCTAGGGATAGACAGAAGCTCAGGAGGCAACTAAACAAGCAGCTCCAATTTCAACAACAGCAACGACAACATCATCAGATGCTAACAGCCCATCAGTGCCAATTGATTAATCAGGATAAGACTCATCACTGGTTTTTTGGTGGTGTCTTTGATTCTTCTCCAGCGGGTTCTTCTTCTGCCCAACAAGTTTCTTTTCATAACCCAGCTGTCTTGCTTTCTCAGGGAGAAACGGGAGGGACAACATCAGAAACATGGAATAAGGCTGCGCAGAGGCATCAAAGTGAGGTGGATAAAACAAAGACATCATCATCATCACTTAACAACTATGGTATGAGTTGTTGGAGTGTTGTGGATGCTAATGAAGAAGCATCCTCATGTTGCAGGACAAGACGGCCTCCTCTCAAGACTCTTGACCTCTTTCCCACTACTTCCACCAAACTCAAACTCTGA 633 0.4344 MSRAGSSRWSPTTEQLMILEELYRSGIRTPSASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRQLNKQLQFQQQQRQHHQMLTAHQCQLINQDKTHHWFFGGVFDSSPAGSSSAQQVSFHNPAVLLSQGETGGTTSETWNKAAQRHQSEVDKTKTSSSSLNNYGMSCWSVVDANEEASSCCRTRRPPLKTLDLFPTTSTKLKL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0238 210 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Lele39g0238 210 Gene3D - 1 67 - -
Lele39g0238 210 CDD homeodomain 8 67 IPR001356 GO:0003677
Lele39g0238 210 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Lele39g0238 210 MobiDBLite consensus disorder prediction 137 164 - -
Lele39g0238 210 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 207 IPR044555 GO:0003700|GO:0099402
Lele39g0238 210 SMART HOX_1 4 71 IPR001356 GO:0003677
Lele39g0238 210 FunFam WUSCHEL-related homeobox 4 6 73 - -
Lele39g0238 210 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0238 Lele-ChrLele39 1593257 1594529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0238 1 74 Wox Gene Family AT2G28610 79.730 5.57e-39 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele39g0238 Homeodomain 1.2e-17 CL0123