Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0218 ATGGTTGACTTTTCAGCCATTTCAGAGTCAGTAATGATGGAGGAAGCAGTAATGGGAGCTTATTCGTCAGATGGGTCAGAAGAAGATGACCTCTTGAGAGAGCTTTTAGATCATAACTATCATTATGAGTCGTCTCCTTTCTTCGCCTCCTCCATTGATGAACCCATCAGCACAATAACATCAGCATCCACCCTTAACTCCTTCATCTCCAACATTTATTCAGGACCTACCATTTCTGATATTGAAAACGCCTTGTCGTTCACCAACCACAAACAACAGTCCCACCAAGACTTCTCCTTATCCAGGGTTTCGATACTGGAGAGAGGACTGAGCAAGATAGAGAATAAGTATACTCTGAAAATGAAGTGCTTTGGGAATGGCATGGGTGATGATGGATATAAGTGGAGGAAGTACGGGCAGAAATCCATTAAGAATAGTCCAAATCCTAGGAGCTACTATAGGTGCACTAATCCAAGGTGCAATGCCAAGAAGCAAGTGGAAAGATGCAATGGGGACCCAGACACTCTTATCATCACTTATGAAGGACTTCACCTTCACTTTGATTATCCATATTTGTTGATGACCCAGGCCCATGAATCCCTTCCACAACCAAGCAAGAGGCTCAAGACCAATACGACATTTTCCCAGGCTCAAGCCCATCAAGGCCCACAAGCACTGCAATCTGATCAGGCCCAGGCCCATGGGGTTAGTGTGGGATCGCAAGGGTTGCTTGAAGACATGGTGCCTTTGATGATTAGAAATCCTACAACTAGAAGTTTAAGTCCTTTGCAGTCTTAA 798 0.4436 MVDFSAISESVMMEEAVMGAYSSDGSEEDDLLRELLDHNYHYESSPFFASSIDEPISTITSASTLNSFISNIYSGPTISDIENALSFTNHKQQSHQDFSLSRVSILERGLSKIENKYTLKMKCFGNGMGDDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCNAKKQVERCNGDPDTLIITYEGLHLHFDYPYLLMTQAHESLPQPSKRLKTNTTFSQAQAHQGPQALQSDQAQAHGVSVGSQGLLEDMVPLMIRNPTTRSLSPLQS 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0218 265 SUPERFAMILY WRKY DNA-binding domain 127 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele39g0218 265 MobiDBLite consensus disorder prediction 203 234 - -
Lele39g0218 265 SMART WRKY_cls 129 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele39g0218 265 Pfam WRKY DNA -binding domain 130 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele39g0218 265 ProSiteProfiles WRKY domain profile. 124 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele39g0218 265 Gene3D WRKY domain 125 182 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele39g0218 265 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 96 217 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0218 Lele-ChrLele39 1444828 1447133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0218 66 258 WRKY Transcription Factor Family AT5G43290 43.946 2.36e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele39g0218 WRKY 2.2e-25 CL0274