Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0213 ATGAGGATAAAGATAGACGAAGATGATTTGGGTCCTGATCGTGAGGTTGAGTTCCAGACTGATGATGAAGAAAACCTAGCTGATAGGGTTTTCGAACATCTAAGTTCGGAGACCGATTCAGAAATTTCCCAACCTAAGTTTTCCAATGACATTGAGGACGATGACGACGTCGTCGGTAGTTCTACGTGGCCTCAAACCTATCGGCAATCTATGGACATGTTAAGCAGTGTAACACCACCTTCAATGAGTTTGATAAGGCAAATAAGTGGTATATCAAGTCGATCAGTAGTCACTTCTATGACTTCACCATCAAAGAGGCATCATCGAAATGATAATGAATCTGATTTAAACACAGCATTCATTCCTGAAACAATCTCATTGATTCAAGAGGAGCCTACCTTCAATAATAGCCCCAGGATATCCTCTCGACTAAATTCTAACTACTCTAAGTATTCTAGTTGTGAATTGCCACCACCTCTAGAGCAATCTTCATTATCACAGTCAATCCTCAATGGAGCCAATTTACTGTGTGGAATAGGACTTCTGACAACACCTTATGCAGTGAAAGAAGGTGGATGGTTAAGTCTTATAATACTTTTCTTGTTTGCCGTCATGTGCTGCTATACTGGTATTTTGTTGAAGAAATGTTTAGAAAGCTCTCCTGGACTCCATACCTACCCGGACATTGGTCAAGCTGCTTTTGGAATGGCTGGTCGCCTAGGGATTGCGCTATTTTTGTACATGGAACTATATGCTGCTTGTGTTGAGTTTATAATACTTATGAGTGATAACCTCTCGTCACTTTATCCCAACACCTACATGAAATTTGCCGGGATTAATTTAAGCACTAATCAAGTTTTCACCATAGCATCAGCTCTATGTGTTCTTCCAACAATTTGCTTACGGAACCTTAAACTCCTTTCCTTCCTTTCAGTTGGAGGGATAGTTGCATCGATATTGGTGACTTCTTGCTTGTTATGGGTTGGAGCAATAGACAAAGTTGGATTTCATGCTGGTGGAAAGGCTATAAACCTTGACAATTTATCAGTCTCAATTGGTCTCTATAGTTTTTGCTTTGCAGGCCACTCAGTTTTTCCAAACATATACTCTTCCATGAAGGAGCCATCAAAATTTTCAGTTGTTCTATTAGTCAGCTTTGGCTTTTGTTTTGTCATATACATAGGAGTTGCAGCATTGGGCTATTTAACGTTTGGTGACTCTATTAAATCTCAGTTTACTCTAAACATGCCCAAAGAATTGTATGCTTCAAATATTGCAGCCTGGACAACTGTTGTGAACCCTTTGACAAAGTATGCAATCACTTTAATGCCTGTTGCCCTGAGCATAGAGGAATTGTTGCCTTCTGCTCAGCTAAGATGTTACTCTGTTTCTGTTCTTATCAGAATAGTTTTAGTTTTCTCAAACGTGGCTTTGGCCCTCTCTATTCCTTTCTTCGGATCTATCATGGCATTTATGGGCTCCTCAATGGCAATGTTAATTGCACTTATTTATCCATGTGCATGTTATCTCAAGATCCACCATGGCAGATTGTCAAAAGTAGAGGTGGCAAGTTGCATGCTTATTATCATTGTGGGAGCGGTGTGCTCTGTAATTGGCACATTTTCAGCAGTTTCAAGAATAGCAAATCAAAAAGAAAATTAA 1662 0.3965 MRIKIDEDDLGPDREVEFQTDDEENLADRVFEHLSSETDSEISQPKFSNDIEDDDDVVGSSTWPQTYRQSMDMLSSVTPPSMSLIRQISGISSRSVVTSMTSPSKRHHRNDNESDLNTAFIPETISLIQEEPTFNNSPRISSRLNSNYSKYSSCELPPPLEQSSLSQSILNGANLLCGIGLLTTPYAVKEGGWLSLIILFLFAVMCCYTGILLKKCLESSPGLHTYPDIGQAAFGMAGRLGIALFLYMELYAACVEFIILMSDNLSSLYPNTYMKFAGINLSTNQVFTIASALCVLPTICLRNLKLLSFLSVGGIVASILVTSCLLWVGAIDKVGFHAGGKAINLDNLSVSIGLYSFCFAGHSVFPNIYSSMKEPSKFSVVLLVSFGFCFVIYIGVAALGYLTFGDSIKSQFTLNMPKELYASNIAAWTTVVNPLTKYAITLMPVALSIEELLPSAQLRCYSVSVLIRIVLVFSNVALALSIPFFGSIMAFMGSSMAMLIALIYPCACYLKIHHGRLSKVEVASCMLIIIVGAVCSVIGTFSAVSRIANQKEN 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0213 553 FunFam Amino acid transporter AVT1A 161 550 - -
Lele39g0213 553 MobiDBLite consensus disorder prediction 1 60 - -
Lele39g0213 553 Pfam Transmembrane amino acid transporter protein 162 541 IPR013057 -
Lele39g0213 553 PANTHER OS05G0424000 PROTEIN-RELATED 172 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0213 Lele-ChrLele39 1418168 1421882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0213 3 553 Amino Acid or Auxin Permease AAAP Family AT5G02180 48.410 0.0 535