Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0211 ATGTTTGTGAAGTTTATGGCGTTGGTGCTTTTGTTGGTGACAACAATGGTGCAAGTGAGTGATGCAAATACAAGTTTCATCTTTAACTATGGCTTCCAATCAGCTGATTTGACCATGGATGGTATTTCTTCCATCACTTCTAATGGCCTCCTACAACTAACCAATGAGACTGGGACGCAAAAGAGTCATGCTTTTTACGCCAATCCAGGTGTTCTCACAAACACTTCTTTCTCTACTACTTTTGTTTTCGCCATTAGACCTCAATATCCAACTCTGCGTGGTCCTGGAATGGCTTTCGTGATTTCTCCAACAAAAGCATTTCCAGGTGCTCTGCCCAGCCAGTACCTCGGCCTCTTCAACATAACCAACAATGGCGACCCGGAAAACCATATCCTCGCTGTAGAATTCGACACCGTCAAGAACAATGAGTTCGGGGATATCAATGATAACCATGTTGGGATTGATATTAACGGCTTGAATTCCACAAAATCTGCTCCTGCTGGATATCATGCCAATAGGTTTCAGTTTCAAAATCTGAGCCTTAACAGTGGCCTGCCGATGCAAGTGTGGGTGGACTATGATGGAGGCAAGAAGCAAATTAGTGTCACCCTAGCTCCAATCAATGTTAACAAGCCCCAAACTCCATTGTTAACGTTGTCCCAAGATCTTTCTCAAATTCTAACCAATCCCAGCTATGTCGGATTCTCATCTTCCAATGGGGCACTGATAGCCTCTCATTATGTTCTTGGGTGGAGTTTCCAGGTCAATGGGAAGGCTCAAAACCTTGACACCTCAAAACTCCCAAAACTTCCTCGACTTGGAGGAAACGAACAATCTATGATTTTGCCAATTGTTTTACCTCTCCTTTCACTTTGTGTAATTGGTCTTGCTAGTTTATCTATAGTTTATTACATACGTTGGGATAGGAAGTTTTCTGAGATTGTTGAGGAGTGGGAGCAAGACTATGGTCCTCAAAGGTTCAAATACAAAGATCTATACGTCGCCACAAAGGGATTCAGAGAGAAAGAGCTTCTAGGCAGCGGTGGTTTTGGCAGAGTCTACAAAGGCACAATGCCAGGTTCGAAAATTGAGGTTGCTGTGAAGAAAGTTTCCCATGAATCCCGACAAGGTATAAGGGAATTCGTTGCAGAAATCGTGAGCATTGGTCATCTTCGCCATCGAAACCTCGTATCTCTTCTGGGATATTGCAGGCGAAAAGGTGAGCTTCTTTTGGTCTATGATTACATGCCTAATGGAAGTTTGGATAAATACCTCTACAACCAACCCAGAGTGACACTCAATTGGATGCAAAGATTTAGAATCATCAAAGGGGTAGCTTCGGGATTGTGCTATCTGCATGAAGAATGGGAGCAAGTTGTGGTTCACAGAGACATAAAAGCGAGCAATGTTCTGCTAGATTTGGAGTTAAATGGAAGGTTAGGAGATTTCGGTCTGGCAAGATTATACGATCATGGGAGTGATCCTGCGACTACACATGTGGTGGGAACCTTGGGATATCTGGCACCAGAGAACACAAGAACAGGTAGAGCCACAACAAAGTCTGATGTTTATGCTTTTGGCGCTTTTTTGCTGGAGGTAGTAAGTGGGAAAAGGCCTATAGAGAGAGGAGGTGAAGAATTCATTTTGGTGGATTGGGTTTATGGGTTATGGAAGAAGGGTGAGATTATTGAGGCAAAGGATCAAAATTTAGGAAGAGAGTACAAAGCAGAGGAGGTAGAATTGGTGTTGAAATTGGGGCTTCTGTGTTCGAATTCAAAGGCTGGAGACAGGCCAAACATGCGCCAAGTAGTGCAGTATTTGAATATGGAAGTGGCTTTGCCTGATCTGCCTTTGCTAATGTCGTCTCCTTCATGTTCTGGATTTGTATTTGGGAGTGATCACCAAGAGTTTGATAACATTGGAATGTCGTTTCCATCTTCAAGTGTGGTGGATGGTTATTTCTCTCGCACTTCAATACCTGAATCCATCCTCTCTGGAGGTCGTTGA 2007 0.4345 MFVKFMALVLLLVTTMVQVSDANTSFIFNYGFQSADLTMDGISSITSNGLLQLTNETGTQKSHAFYANPGVLTNTSFSTTFVFAIRPQYPTLRGPGMAFVISPTKAFPGALPSQYLGLFNITNNGDPENHILAVEFDTVKNNEFGDINDNHVGIDINGLNSTKSAPAGYHANRFQFQNLSLNSGLPMQVWVDYDGGKKQISVTLAPINVNKPQTPLLTLSQDLSQILTNPSYVGFSSSNGALIASHYVLGWSFQVNGKAQNLDTSKLPKLPRLGGNEQSMILPIVLPLLSLCVIGLASLSIVYYIRWDRKFSEIVEEWEQDYGPQRFKYKDLYVATKGFREKELLGSGGFGRVYKGTMPGSKIEVAVKKVSHESRQGIREFVAEIVSIGHLRHRNLVSLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPRVTLNWMQRFRIIKGVASGLCYLHEEWEQVVVHRDIKASNVLLDLELNGRLGDFGLARLYDHGSDPATTHVVGTLGYLAPENTRTGRATTKSDVYAFGAFLLEVVSGKRPIERGGEEFILVDWVYGLWKKGEIIEAKDQNLGREYKAEEVELVLKLGLLCSNSKAGDRPNMRQVVQYLNMEVALPDLPLLMSSPSCSGFVFGSDHQEFDNIGMSFPSSSVVDGYFSRTSIPESILSGGR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0211 668 Pfam Legume lectin domain 24 268 IPR001220 GO:0030246
Lele39g0211 668 Pfam Protein tyrosine and serine/threonine kinase 342 607 IPR001245 GO:0004672|GO:0006468
Lele39g0211 668 CDD lectin_legume_LecRK_Arcelin_ConA 24 257 IPR001220 GO:0030246
Lele39g0211 668 PANTHER - 17 614 - -
Lele39g0211 668 FunFam L-type lectin-domain containing receptor kinase S.4 416 619 - -
Lele39g0211 668 ProSitePatterns Protein kinases ATP-binding region signature. 345 369 IPR017441 GO:0005524
Lele39g0211 668 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 273 IPR013320 -
Lele39g0211 668 Gene3D Transferase(Phosphotransferase) domain 1 416 612 - -
Lele39g0211 668 FunFam L-type lectin-domain containing receptor kinase V.9 23 260 - -
Lele39g0211 668 ProSitePatterns Legume lectins beta-chain signature. 132 138 IPR019825 -
Lele39g0211 668 SUPERFAMILY Protein kinase-like (PK-like) 320 622 IPR011009 -
Lele39g0211 668 SMART serkin_6 339 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0211 668 Gene3D - 22 271 - -
Lele39g0211 668 ProSiteProfiles Protein kinase domain profile. 339 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0211 668 FunFam Lectin-domain containing receptor kinase A4.3 324 415 - -
Lele39g0211 668 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Lele39g0211 668 CDD STKc_IRAK 345 608 - -
Lele39g0211 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0211 Lele-ChrLele39 1408952 1410958 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0211 18 668 Receptor kinase-like Gene Family AT2G37710 60.423 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele39g0211 PK_Tyr_Ser-Thr 6.6e-47 CL0016