Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0176 ATGCTCCAGAAGGACGTAGAGGGATCGGCGGTGCAAGGTGTCGTGGATGAGCTAAAAGACAAAAATCATGCCTATTCTGATGGGCTTGAAATTTCCAACTACTTCAAGAGAGCCCTCGCTCGTTTCTGGTCTAAGTTCATCGATGACAAGGTGTTGCCCGCAGTATTTAAAGCTGCCATGAGCCCAAACGAGGAGGAGAGGGAAAAAGCTGCTGAAGAATTAAAAGAGGCTCTGAAGATTCTGGACAATGAGCTGAACGGGAAGTTCTTTAATGGAGATTCAATTGGGTTTGTGGACATCGCTGCCCTGTTCATCGCTTTCTGGCTGCCGATAATTCAAGAAGCTGGTGGGCTTGATCTGTACAGTGCTGAAAAATATCCAAAGTTAGAGAAGTGGGGTCAAGAGATTTTGAATCACCCTGTTGTGAAAGGAGTTTTGCTTCCAAGAGAGGTTCTCCTTGCCTACTTCAAGGGTCGCTTTGCTTCAAAGTAG 492 0.4614 MLQKDVEGSAVQGVVDELKDKNHAYSDGLEISNYFKRALARFWSKFIDDKVLPAVFKAAMSPNEEEREKAAEELKEALKILDNELNGKFFNGDSIGFVDIAALFIAFWLPIIQEAGGLDLYSAEKYPKLEKWGQEILNHPVVKGVLLPREVLLAYFKGRFASK 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0176 163 Pfam Glutathione S-transferase, C-terminal domain 51 140 IPR004046 -
Lele39g0176 163 CDD GST_C_Tau 35 159 IPR045074 GO:0004364|GO:0006749
Lele39g0176 163 FunFam Tau class glutathione S-transferase 32 163 - -
Lele39g0176 163 Coils Coil 64 84 - -
Lele39g0176 163 Gene3D - 33 163 - -
Lele39g0176 163 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 33 144 IPR045073 -
Lele39g0176 163 SUPERFAMILY GST C-terminal domain-like 32 160 IPR036282 -
Lele39g0176 163 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 33 163 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0176 Lele-ChrLele39 1182328 1187425 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0176 35 162 Glutathione S-transferase Gene Family AT3G09270 49.612 3.33e-37 125