Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0172 ATGACTATAAAAGACGTCATGGAAGGTGTGCCGACGGATGTTCCATACAACTCCAACTCCACAGTGGCAGCGACAGCGAGGCTGGCCGGAAGGCGTATTCCGATACACACGACGTTATATTGGGGCCACAAGGCATACGTGCTTTTCCCGTCCTGGCCTGGAGATAATGCCGCCATGTACAGTCTAACTTTGGTGGTGTTGGTCTTTGCCGTGGCTGTGTTGGTGGAGTGGCTTTCTTTCATGGACATGGTGAAGTTAAAGACCGGCAAGAACGAGGTCGTTGCTGGGATGCTCCGGACGGCGATCTATGGCCTTCGAACCGGCCTCTCTTACACGGTCATGCTGGCCGTCATGTCATTCAACGGCGGCGTGTTTGTCGTGGCCATTGTCGGTCATGTCATCGGCTTCTTGGTTTTCGGTACTCAGGCTATCCGGAGGAAGAAGGCCGGCGGGTCGGACCCTGATAAGGTATCCGACTTATGA 483 0.5445 MTIKDVMEGVPTDVPYNSNSTVAATARLAGRRIPIHTTLYWGHKAYVLFPSWPGDNAAMYSLTLVVLVFAVAVLVEWLSFMDMVKLKTGKNEVVAGMLRTAIYGLRTGLSYTVMLAVMSFNGGVFVVAIVGHVIGFLVFGTQAIRRKKAGGSDPDKVSDL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0172 160 Pfam Ctr copper transporter family 97 139 IPR007274 GO:0005375|GO:0016020|GO:0035434
Lele39g0172 160 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 35 146 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0172 Lele-ChrLele39 1148869 1149351 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0172 38 148 Inorganic Solute Cotransporters AT5G59030 49.107 1.05e-33 115