Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0140 ATGCCTTCTTCTTCTACAACCATTGTCTCCAAATGCACTATCTACCCAGATCAGAAATCCCCTCTTAAGACTCTCAAGCTTTCTGTCTCTGACCTTCCTATGCTCTCTTGCCATTACATTCAGAAGGGTGTTCTGCTTCCCCTCCCTCCTTACTCCTTCGATGATCTCATCGTCTTCCTCAAACACTCGCTTTCTCTCACTCTTTCCCATTTCCCCGCCCTGGCCGGCCGCCTCATCACTGATGATCTAGGCTATGTCCACATCCTCTGTAATGATGCCGGCGTGGATTTTGTTCAGGCCAGGGCTAAACACCTCCTTATCGACGCAATTTACTCCCCTGAACTTGTGGATGTGCCCAATTGCTTTAAGGAGTTTTTTGTCTACGACAACACCATCTCTTATTCCGGGCATTACAACCCGCTCGCCGCCGTCCAGGTCACCGAGCTCGCCGATGGGGTGTTCATAGGATGCACCGTGAATCACTCCATCACCGACGGGACTTCCTTCTGGCACTTCTTCAATACCTTCGCCGAGACCTGTAAGGGCGTGAAGAAGATATCGAGGTCGCCGGATTTCACCCGCGACACCGTTTTCAACTCTCCCGCCGTGCTAAGGGTACCCGAAGGCGGCCCGAAGCTAACCTTCGACGCCGACCAGCCCCTCCGGGAGAGAGTTTTCCACTTCAGCAGGGAGGCAATTCAGAAGCTGAAGCTGACAGCCAATAATGGCGGCCGTAACGGTTTCGCGGATTCCCCGGAGGTAATGGGGAAGAAGGTTAACGACAGTTGGAAAACCGTTAACGGCGTCACTAACGGGCAAGTAACGGCAGTTAACAACGATGTTCCAGCTAGGACAGGAGAGATCTCATCTTTCCAATCCTTATCTGCTCAACTGTGGCGTTCCGTGACACGTGCGAGGAAGCTGGACCAGTCCAAAACGTCGACGTTTCGTATGGCGGTGAACTGTCGCCACCGTCTGAAGCCCAAGATGGACGCTTACTACTTCGGCAACGCGATTCAGAGCACCCCGACCGTCGCTGAGGTCGGCGAGATCCTGTCTCGCGATCTGCAATGGTGCGCGAATCTCCTCCATCAGAACGTCGTCGTACATGACGATGCCCAGGTGCGCCGCGGCATAGAGGATTGGGAGAAGGCTCCAAGGCTGTTTCCGCTGGGGAACTTCGACGGCGCATCCATCACGATGGGCAGCTCCCCTCGTTTTCCGATGTACGACAACGATTTCGGATGGGGGCGACCGTTGGCGGTGAGAAGCGGGAAGGCGAACAAATTTGACGGGAAGATTTCCGCGTTTCCGGGAAGAGAAGGGAACGGAAGTGTTGATCTGGAAGTAGTTTTGGCTCCGGAGACCATGGCGGGAATCGAAAACGACACGGAGTTTATGCAGTACGTATCGCCGATCGTAGCAAGAATGGTAATCCAAATGAATAGCCTATGGATACCATTATCGACCTCCAGGCTCATGTCTGACGTCAGCAGAGTTGTCTCTGAAACACAACCACCACAAAACAACTACGATTGTTGGGAGAGCACCAAATCTCTGTTGAAGCTTGACCAACATTGTGGCTTCCTTTTCATTGTTCATCCGGGAAGGGAAGCGGTACTTCCCCCCATGGTCAGGGGAGACAATCGTCCATCCATCTATTTATTTCAGTAA 1674 0.5287 MPSSSTTIVSKCTIYPDQKSPLKTLKLSVSDLPMLSCHYIQKGVLLPLPPYSFDDLIVFLKHSLSLTLSHFPALAGRLITDDLGYVHILCNDAGVDFVQARAKHLLIDAIYSPELVDVPNCFKEFFVYDNTISYSGHYNPLAAVQVTELADGVFIGCTVNHSITDGTSFWHFFNTFAETCKGVKKISRSPDFTRDTVFNSPAVLRVPEGGPKLTFDADQPLRERVFHFSREAIQKLKLTANNGGRNGFADSPEVMGKKVNDSWKTVNGVTNGQVTAVNNDVPARTGEISSFQSLSAQLWRSVTRARKLDQSKTSTFRMAVNCRHRLKPKMDAYYFGNAIQSTPTVAEVGEILSRDLQWCANLLHQNVVVHDDAQVRRGIEDWEKAPRLFPLGNFDGASITMGSSPRFPMYDNDFGWGRPLAVRSGKANKFDGKISAFPGREGNGSVDLEVVLAPETMAGIENDTEFMQYVSPIVARMVIQMNSLWIPLSTSRLMSDVSRVVSETQPPQNNYDCWESTKSLLKLDQHCGFLFIVHPGREAVLPPMVRGDNRPSIYLFQ 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0140 557 Gene3D - 219 466 IPR023213 -
Lele39g0140 557 Pfam Transferase family 6 467 - -
Lele39g0140 557 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 468 - -
Lele39g0140 557 Gene3D - 6 206 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0140 Lele-ChrLele39 910783 914181 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0140 8 462 Monolignol Biosynthesis Gene Families AT5G48930 26.350 1.58e-34 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1271 37 21927531 21928934 Lele39g0140 39 910783 914181 hybridization
Lele38g1166 38 22772963 22775718 Lele39g0140 39 910783 914181 hybridization