Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0134 ATGAGCGTGCTCCAGACTACACATCCACCTCCCGCACCGTTTCTTGATCCCACTGAGTTATCTTCCTGGTCATTCTACCAAGCCGGCATAGGGAGTTTGTGGCCACCTTCTTGTTCCTCTACATCACTGTTTCAACTGTCATGGGTGTGGCTACGTCTCCCTCCAAATGTTCCTCTGTGGGAGTTCAAGGCATTGCCTGGCCATTTGGTGGCAAGATCTTTGCTCTTGTTTATTGCACTGCCAGTATCTCAGTATGAGATGCTTGGAGGGGCTGCCAATAGTGTTAATGAAGGATATTCCATGATTACTGGCCTTGGTGCAGAAATCATCGGCACTTTTGTGCTTGTTTACACTGTCTTCTCAGCCACTGATGCCAAACGAAACGCTCGAGACGCTCACGCTATGCTGTTACCACTGCCTACTGTGTTTTCTGTGTTTGTGGTGCATTTGTATACAATTCCAATCACAGGGACTGGGATCAATCCTGCAAGGAGTCTTGATACAGCACTCGTTTTGAACAAGGATCGAGCTTGGGACGACCATTGGATCTTCTGGGTGGGGCCTTTTCTCGGGGCAGGACTTGCAGCTTTGTAG 594 0.4899 MSVLQTTHPPPAPFLDPTELSSWSFYQAGIGSLWPPSCSSTSLFQLSWVWLRLPPNVPLWEFKALPGHLVARSLLLFIALPVSQYEMLGGAANSVNEGYSMITGLGAEIIGTFVLVYTVFSATDAKRNARDAHAMLLPLPTVFSVFVVHLYTIPITGTGINPARSLDTALVLNKDRAWDDHWIFWVGPFLGAGLAAL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0134 197 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 82 197 IPR034294 -
Lele39g0134 197 Pfam Major intrinsic protein 67 197 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele39g0134 197 Gene3D Glycerol uptake facilitator protein. 64 197 IPR023271 -
Lele39g0134 197 SUPERFAMILY Aquaporin-like 74 197 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0134 Lele-ChrLele39 878394 879469 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0134 19 197 Major Intrinsic Protein MIP AT3G61430 46.491 2.05e-57 181