Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0110 ATGATGAGATTTTTATTCTACCAATTACCTAAGAGAGAAGCAATTCAGAAGAAGAAGAAGAAGAAGATGGGATTGGAGCAATTGAGTCTGAACGATACAAAGGGCAAGATCATTACTTGCAGAGCTGCTGTTGCTCATGGAGCTGGAGAACCGTTCGTGATAGAACAAGTTAAAGTTCATCCTCCTCAGAAAATGGAAGTCCGAATCAAGATCCTCTTCACTTCTATCTGCCACACAGATCTCACCGCCTGGCTCGGCCACAATGAAGCCCAAAGGGCCTATCCGAGGATTTTTGGCCATGAAGCATGCGGGATAGTGGAGAGCGTAGGGGAAGGAGTAAAGGATGTGAAAGAAGGGGATTATGTGGTTCCCATTTTCAACGGCGAGTGTGGCGACTGCAAGCTGTGCAAGTGTGAGCATACCAATATGTGCCAAAAATTCGGAGTCAACCCCATGAAGAAGGACATGGTGGCGGACGGCGCCACCAGGTTCACCACCGTCGACGGCGGCAGCCCCATCTACCATTTCCTCAACACCTCCACCTTCACCGAGTACACCGTCGTGGACTCCGCTTGTGTCGTCAAGCTCACCGGCGTCGTCGATCAAAATAGCCTCAAAAAGCTCTCCTTGCTAAGCTGTGGGGTTTCCACGGGTGTAGGAGCTGCATGGAACACAGCCAACGTGCAATCTGATGCCACTGTTGCTGTCTTCGGTTTGGGAGCCGTGGGCCTCGCTGTGGCCGCAGGAGCACGTGCCAGAGGAGCATCCAAAATAATCGGCATAGACATCAACCCCGACAAATTCATCCGAGCTCGGGAGATGGGAGTGACGGATTTCATAAATCCAAGGGATGAAGAGAAGCCTGTTTACAAGAGAATAAGAGAAATGACTGAAGGAGGAGCAGACTTTAGCTTTGAATGTGTAGGAAACTCTGATGTCCTCCGAAATGCCTTCTTGTCTGTGCATGAGGGATGGGGATTGACAGTGATATTGGGAATTCATGCAACACCACAAATGCTTCCAATTCATCCAATGGAGCTGTTTGATGGTCGCAGAATTGTTGCTTCAGTCTTTGGAGGGTTCAAAGGGAGGACCCACCTCCCTCTTTTTGCCAAACAATGCTTGCAAGGAGTGGTGAAGCTGGACGAGTTCATTACTCACGAGCTTCCTTTTGATGAGATTAACAAAGCCTTTGATCTTTTGGTCTCTGGAAGGTCACTGAGATGTCTCCTTCACCTGTGA 1242 0.4911 MMRFLFYQLPKREAIQKKKKKKMGLEQLSLNDTKGKIITCRAAVAHGAGEPFVIEQVKVHPPQKMEVRIKILFTSICHTDLTAWLGHNEAQRAYPRIFGHEACGIVESVGEGVKDVKEGDYVVPIFNGECGDCKLCKCEHTNMCQKFGVNPMKKDMVADGATRFTTVDGGSPIYHFLNTSTFTEYTVVDSACVVKLTGVVDQNSLKKLSLLSCGVSTGVGAAWNTANVQSDATVAVFGLGAVGLAVAAGARARGASKIIGIDINPDKFIRAREMGVTDFINPRDEEKPVYKRIREMTEGGADFSFECVGNSDVLRNAFLSVHEGWGLTVILGIHATPQMLPIHPMELFDGRRIVASVFGGFKGRTHLPLFAKQCLQGVVKLDEFITHELPFDEINKAFDLLVSGRSLRCLLHL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0110 413 Pfam Zinc-binding dehydrogenase 241 360 IPR013149 -
Lele39g0110 413 PANTHER ALCOHOL DEHYDROGENASE 35 410 - -
Lele39g0110 413 SUPERFAMILY GroES-like 362 412 IPR011032 -
Lele39g0110 413 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 205 377 IPR036291 -
Lele39g0110 413 FunFam S-(hydroxymethyl)glutathione dehydrogenase 218 356 - -
Lele39g0110 413 FunFam Alcohol dehydrogenase 6 43 233 - -
Lele39g0110 413 Gene3D - 218 356 - -
Lele39g0110 413 Gene3D - 44 409 - -
Lele39g0110 413 SUPERFAMILY GroES-like 33 228 IPR011032 -
Lele39g0110 413 Pfam Alcohol dehydrogenase GroES-like domain 66 195 IPR013154 -
Lele39g0110 413 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 99 113 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0110 Lele-ChrLele39 751579 757520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0110 66 402 Monolignol Biosynthesis Gene Families AT2G21890 27.635 2.78e-13 68.9