Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0105 ATGAAAGGAAGCTTTGTGTGGAGTTTTACCAAGAAATTTATCACATTTGGGCTCATTACTGTCACGGTAACAGATCGTTATGTGAGCATTGTTCCAGTTCATGGTGGCTCTATGTCTCCCACATTTAATCCTAAAACCAGCTCTTCGACAGGGAATATTTCTGATGACTATGTCTTGGTTGAGAAATTTTGCCTTGGAAACTATAGATTTTCCCATGGTGATGTGGTGGTATTCCGCTCCCCCTTAAATCACAAGGAGACGCACATTAAGAGAATTGTTGCATTACCTGGGGAGTGGTTTGGTGCACATCGTAACTATGATGTGCTGAAGATTCCAGAAGGACACTGTTGGGTTGAGGGAGACAATGCAGCTTCCAGCCTGGATTCAAACTCATTTGGTCCTATTCCTCTGGGTTTAGTTCGAGGAAGGGTGACCCACGTTGTATGGCCTCCTCAAAGAATAGGTGCTGTGAAGAAGATCCCACCAGAAGGATTTCCTTCCTAA 504 0.4405 MKGSFVWSFTKKFITFGLITVTVTDRYVSIVPVHGGSMSPTFNPKTSSSTGNISDDYVLVEKFCLGNYRFSHGDVVVFRSPLNHKETHIKRIVALPGEWFGAHRNYDVLKIPEGHCWVEGDNAASSLDSNSFGPIPLGLVRGRVTHVVWPPQRIGAVKKIPPEGFPS 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0105 167 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 4 160 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
Lele39g0105 167 Gene3D Umud Fragment, subunit A 24 160 - -
Lele39g0105 167 Pfam Signal peptidase, peptidase S26 9 98 IPR019533 GO:0004252|GO:0006465
Lele39g0105 167 Pfam Signal peptidase, peptidase S26 108 149 IPR019533 GO:0004252|GO:0006465
Lele39g0105 167 FunFam Mitochondrial inner membrane protease subunit 24 162 - -
Lele39g0105 167 CDD S26_SPase_I 29 144 IPR019533 GO:0004252|GO:0006465
Lele39g0105 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 111 130 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele39g0105 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 26 42 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele39g0105 167 PRINTS Bacterial leader peptidase 1 (S26A) family signature 88 100 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele39g0105 167 SUPERFAMILY LexA/Signal peptidase 29 157 IPR036286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0105 Lele-ChrLele39 726828 731185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0105 38 161 MADS-box Gene Family AT1G29960 36.154 4.96e-19 76.3