Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0102 ATGGCTACAACAGCCACGATGATAAGAGCCACAAGGTTTCAAGTGATCAATGCGACGTCGTCGTCTTCTTCCAGCGGCGGAAGGAGCAGCAGCGGACGGAAGCTGATAGAGTCAGGGACGGTGAGGGCGATACAGCCAAGGGAAGCTTACAAGGCGATGAGCACAGAGGGGTTTGTGCTGCTAGACGTGAGGCCAGTGTGGGAGAGGGAGAAGGCACGTGCGAAGGAGTCAGTGCACGTGCCAATATTTGTGGAAGACAAGGATGTGAGTGTTGTGACTCTGTTGAAGAAGTGGGTTCACTTTGGTTATATTGGATTGTGGACAGGTCAATACTTGACTACTATCAATGCAGACTTCCTTGCTCAAGTGGAAATGGCCATTCCTAGCAAAGACACCAACGTTCTTGTGGCTTGTGGTGAAGGTCTCAGGTCAATGATAGCATTGTCAAAGCTGTATGAAGGAAGTTATAGAAATCTGGGATGGCTAGTTGGAGGGTTTAATCGTTCTAAAGATGAAGACTTCCCAGAAGTAGATGGACAAGAAAAGTTGCAGTACGCTACTATAGGAGGAGTCTCCTACTATTTTCTTCAGTTGCTCTTACTTCTACAATCTGCAAGTAAAGGATAA 627 0.4721 MATTATMIRATRFQVINATSSSSSSGGRSSSGRKLIESGTVRAIQPREAYKAMSTEGFVLLDVRPVWEREKARAKESVHVPIFVEDKDVSVVTLLKKWVHFGYIGLWTGQYLTTINADFLAQVEMAIPSKDTNVLVACGEGLRSMIALSKLYEGSYRNLGWLVGGFNRSKDEDFPEVDGQEKLQYATIGGVSYYFLQLLLLLQSASKG 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0102 208 Pfam Rhodanese-like domain 46 168 IPR001763 -
Lele39g0102 208 ProSiteProfiles Rhodanese domain profile. 54 178 IPR001763 -
Lele39g0102 208 Gene3D - 41 187 IPR036873 -
Lele39g0102 208 FunFam Rhodanese-like domain-containing protein 10 41 185 - -
Lele39g0102 208 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 16 206 IPR044614 -
Lele39g0102 208 CDD RHOD 48 167 - -
Lele39g0102 208 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 39 180 IPR036873 -
Lele39g0102 208 SMART rhod_4 44 175 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0102 Lele-ChrLele39 701853 703038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0102 31 194 Sulfurtransferasese or Rhodanese AT3G08920 60.976 1.26e-75 225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1309 37 22172598 22173812 Lele39g0102 39 701853 703038 hybridization
Lele38g1203 38 23021903 23022843 Lele39g0102 39 701853 703038 hybridization