Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0093 ATGGAGGGCCATCATCTACATCATCCTTACCCTCATCATCCTCTTCATCTTCATCGTCAACAACAACAGCAACCTCAGCAACATCATCATCAGCAGCAGCAGCAACATAGTATTGGGGGTGTTACGGCGGCGGTTAACGTTGTTGATGTCGGAGAAAGGTTTCCTCAATGGAGTATTCAAGAAACGAAGGAGTTCTTGATGATGAGGGCAGAGCTGGATCAGGCTTTTATGGAGACGAAGAGGAACAAGCAGTTATGGGAATTTATTTCCAACAGGATGAAGGAAAAGGGTTACCTTCGAAGCCCAGAGCAGTGCAAGTGCAAGTGGAAAAACCTTGTCACCAGGTACAAGGGATGTGAAACAATGGAGGCAGAAGCTCTGAGGCAGCACTTCCCATTTTACAACGAGCTTCAGTTGATATTCGCGAGTAGGATGCAGAGAATGCTGTGGGCAGAAGCCGAAGGAGGAGCCGGCGGATCGAAGAAGAAGGTCCCAGAGAATCTGTCATCAGAAGATGAAGAAGAAGATAACAACAACAAAGAAGACAGTGAAGGGGATCAGAAAGGTGCAACAAGTAGCAGCAGAAAGAAGAAGAAGGGAATTAGGGGTCGTAGTAGTGGTGGTAATTATAGTAGTATTAATGAGAGCTTGAAGGACATGAACGAGATATTGCAGGACTTTATGAGGCAACAGATGCAAATGGAGTCACAGTGGATGGAAGCTTATGAAGCGAGGGAGAAGGAGAGAAGAATGAAGGAGCTTGAATGGAGGCAAACAATGGAGGCATTGGAGAATGAGAAGATAATGATGGATCAGAGATGGAGAGAGAGAGAAGATCAACGGAGGCTTAGAGAAGAAGTTAGGGCTGAGAAAACAGATGCTCTTATCACTGCTCTTCTTAACAAGCTCTCAAGAGAAGACATGTAG 927 0.4552 MEGHHLHHPYPHHPLHLHRQQQQQPQQHHHQQQQQHSIGGVTAAVNVVDVGERFPQWSIQETKEFLMMRAELDQAFMETKRNKQLWEFISNRMKEKGYLRSPEQCKCKWKNLVTRYKGCETMEAEALRQHFPFYNELQLIFASRMQRMLWAEAEGGAGGSKKKVPENLSSEDEEEDNNNKEDSEGDQKGATSSSRKKKKGIRGRSSGGNYSSINESLKDMNEILQDFMRQQMQMESQWMEAYEAREKERRMKELEWRQTMEALENEKIMMDQRWREREDQRRLREEVRAEKTDALITALLNKLSREDM 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0093 308 PANTHER FI21293P1 23 304 - -
Lele39g0093 308 FunFam Zinc finger and SCAN domain-containing 20 57 118 - -
Lele39g0093 308 Pfam Myb/SANT-like DNA-binding domain 56 138 IPR044822 -
Lele39g0093 308 Gene3D - 57 118 - -
Lele39g0093 308 MobiDBLite consensus disorder prediction 154 214 - -
Lele39g0093 308 Coils Coil 217 237 - -
Lele39g0093 308 ProSiteProfiles Myb-like domain profile. 57 113 IPR001005 -
Lele39g0093 308 MobiDBLite consensus disorder prediction 17 38 - -
Lele39g0093 308 MobiDBLite consensus disorder prediction 1 38 - -
Lele39g0093 308 CDD GT1 55 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0093 Lele-ChrLele39 630173 631603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0093 26 306 Trihelix Transcription Factor Family AT2G38250 55.477 1.69e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele39g0093 Myb_DNA-bind_4 2.2e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele37g1318 37 22238515 22239942 Lele39g0093 39 630173 631603 hybridization
Lele38g1212 38 23106009 23107486 Lele39g0093 39 630173 631603 hybridization