Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0081 ATGGCAGAAATTGCCGTTGCGATAATAGAAAAGACGGTGATGTCTATTGTTAGGCAAGTGGAATATGTTTCATGGTACAAAAAGAATTTGAATGAATTGAAGGAGCAAGTTGAGGAGCTGAAAATAGTACAAGAGGTTGTGATCCATGAGGTGAAAGCAGGAAGAAGAGATGGGAAAGCGATTGAAGATGTAGTGGTGAGATGGCTCAACAGAGTTGATGAGAGTTTACAAGAAGCAGATAAACTTTTTAAGGATCCACGCAATGCTACTGCGGTGGGCTCGTTTCCTAATTTGAAGTCACGATATCTACTTAGTCGAAAAGCAAAGAGCTTGGCAGTTGACATCGATCAACTTTCTTCAGCAGGCAGATTCGATCATGTAACAAAAACACATGGTGAAGAGCTTGAGTCAAGGAAGTTGATGAAGGAGGAAATTGTGTCGGTTCTAAGATATGGCAATGTATCCATAATAGGGATCTATGGATTAGCTGGTGTGGGAAAGACCTTTCTGGCTCAACAAGTTGCCCAACAAGTAGAGGGAGACATGTTTAAGGTAGTGTATTTGACGACTGCATCCCAAACGACTTTAGATGTTGATGAGAGGATTATGAAGGAGGAAGGAAGAATCCTCATCATACTTGATGATGTTTGGGGAATAATTGATTTGCAAGAGTTGGGAATTTTTCATTTGACAGGGCGCTTCAGAGTATTGTTGATTTCGAGGAATCAACATATGTTACAAAAGAATGGGACTCAACGGGATTTCAAACTTGAAGTTCTGGATGATGCAGAATCATGGAGCTTATTTCAGTCTAGAGCTGGTGGTGATGTCCTCAAGGATGCCCATTTGAGAAACATAGCCAAGCAACTGGCCCAAAGATGCGCGGGCTTGCCGATCGCAATAATCACGATGGCGGAGTCATTGAAAGACAAGGGTGTTTCTTATTGGGAAGAGGCCTTGAGGATCCTCAATGAGAATGATTATGAGAAAATGGAAGACACAATTTATTCGTCTGTGCAATCAAGTTACAATCAATTGGAAGGTGATGAAGTGAAGAGAGTATTCTTGCTTTGTGGAGTACTTGGACCATGCAATATTCTTGTTAGTGACTTGTTGAAATATGCAATCGGTTTGGGTGTGTTGAAGCATGTAAATTCCATTGATGATGCAAGAAGCAAACTTGACAGAATCTTTGTTGACTTGGAGGAGACGTCTTCTATGTTGCTTCAGCACGGCAGCCCAAGAGAGGTCAACGTGCATGCCCTTGTTTGCGATGCAGCTTCCTTAATTGCATTTAGGCATCATTATGTTTTCACAAGGAATGCTTCGCTCAAAGATTGGCCAGGGGAGGATTTTCTTGCAAGGTGTACGCAGATCATCTTGAAGCGTTGTGATATCCAAAGACTTCCACAAAGGTTAGATTGCCCCAATTTATATTTCCTATACTTAGACCCCAATGATAATCTCACTTTGGAAATTCCGCATTCCTTCTTTGAAGGGATGGGAAATCTTCAAGTGTTGGTTTTGATAGGCATGACCATAACACCTTCATTGCCCGCATCTCTTGTTTCCCTTGCCAAACTCAAAACACTCTGTTTCAATCAATGTCGGTTGCAAGACATGGCCGGAATAGGTGCCTTGAAAAGTTTAGAAATTCTTAGCTTCTTCAAATCATCCATGAAAGAGTTGCCGAGTGAAATAGGGCGATTGACTCAACTAAGAATGTTGGATTTGAGTTCTTCTAAAATTGAGATCATCCCACCCAACATCATCTCCAACTTGACCAAACTAGAGGAATTGTATATGGGCGCTGTGCAAGAAGAACATATTCTTGCTGAGCTTATGCATTTGACAAGATTGGCCGCTCTAGAGCTTCAAATTCACGGCGCTTCGAGTTTATGGTGGTGCTACATAATATTTGAGAGGCTACAAAGATACAACATAGTTATTGGCGACAAATGGGAATGTTCGGACTCAAATGGGTCCTCGAGGTTGTTAAAGCTAAAGCTATATCCGGACACTCATTTGGAAGAACTGTTTAAAGCAATAGTTAAGACAGCGGAAGATTTGTACTTTGAAGGAATCAATGGCTTTTCGAATGTGCTTAATTTGAGTGGCGAAGGATTGCCCCTGCTGAAGAAGCTCCACATCCGAAATAATTCAAAAATTCAACACATTGTGGGCTATAGGATTCAAACCCCTGCTTTTCCTTTTCCAAATTTGAAGACAATGATACTTGACAACCTCAATAACTTGAAACAGATATGCCTTGGCCCCGTGGCCATTAATGCTTTTGAAACACTTAAACTCATCAAGGTCAAAAGTTGTGACCGATTAGAATATCTCTTTGATATCTGGATGTTTGAAAATTCTCCGAGACTTGTTGAGATTGAAGTTTCTGAATGCAGTTCCATGAAGAATATTGTGCTTCTGGATACCGACACAACATCAAGAACGGCTAAGTCTATTCTAGTGGACTCCCTAACTTTGCAACATTTACCAGAAATAAGTGGTTTTTTCTCTAATGAACGCAATGTCGTTGGATGTCCTGATATCCCCACATTATTTCCCAATTCAACGGTCCATCTTCTTGCCTTGAAGCATTTGAAGTTGATCAGTATATCCACAATAAAGCGTTTAGTTTGGATGTCTCCGTCTATCATACAGGGGCATCTAGAAGATTTGGAAACAATGAAAATTGTGGAGTGCAATGATCTCGATTATTTATTCGTCATTGAAGGTTCTGTTGATGATATCTATGATGAAAATTCACTTGGTGGATTACTACTTAAGTTACGTAAGCTTTGTTTGCTAAATCTTGATAGCTTAACGAACATAGTAGTATACCCCAAAAATAATCATTGGAGAACATTGAAGTTTAGAATGTTGAATCATCTCACAGTTTGTCGCTGTAACCAACTGAAATTTCTTCTTCCTCTATACGTCATCCACGATCTGCAGCAGCTCAAAAGTATTAAAATAAGTGACTGTGGGAAGTTGGAACAAGTTTGTGCTGATGAAAAAACACAAACGAGGAAGTCGTCGTCAAATGTGATGAAGGAGGTGCTACCCCTCTTGCAATCTCTTAAGCTCAGCAATTTGCCTGAGCTTATAAGTATTTGTTCAGGAGCTGCTCATGTTATATCTGGTTCCTTGACTCAAATGACCGTAGAAAACTGTCCTAAATTCATTTTCACATTTGCGTATAAATTGAAAGGTACCGAGGAACAAGAACCCTCTAAGAAAAAGTCCAAAGAGACGATCGTCATCCCTTCAAAACTGGAGAATTTGAATCTCCGTAAGGTGGATCACTTGAAAAATATGTGCAATTATCCACTGTTTAGCCTTATGCGTCTGACATCTCTACAACTGGACAACTGTAGCAAATTGGAATATCTGTTTTCATTATCAATGGCCCAAGAGCTTTCCTCCCTACGGGAGCTGAAGATAATTTCGTGTGACAAGATCGAGCAAATTGTGAAAAGAGAAACAGAAGAAAGAGCAAGTGCAAATACTGTAGAGTTCCCTCAGGTGGAAACTCTAGTTCTTGACCAGTTGCCTAAATTTAATGGCTCGTTCAGCAGCCAGGATGGTGCTAGTGTTAAATGGGTTGCCTTGGATACGGTAAGAGTTGCAAAGTGTCCCAAGATTCAAAAGTCAATGTTGGGAACGGTGGATAGACCTCTTTTGAAGAAAGTCAAAGTGGAAAACTGCTCGCCATGGGAATATGAAGATCTTGAGAGCAACATGGGTTATCTCTTCGAGTTTACTGATGAACTCTCGAAAGCTGAAAATTTAAGAATTGAAGACTCGAATAAGTTGAAATTTATGGAAATGAAGCTTCAACAATCATCTTTGAGGCAACTGAAGACGGTAGAAGCCTTACGGTGTGATAATGAGCTGAACAAGTTTTTGTCCATCTTGCTTCATCGGTCGCATAAGCTTGAGCGACTGACAGTCGAAAGGTGCGAACTGCTGGAACAAGTTTTCGACCTCGGAGACTTGGCTCCTGATAAACAAGGATCTCGTTTCTTCCCCAATTTACATACAATGCAATTGCTTTGTTTACCCAAATTGAATTGCGTATGGAACAAGGATCCAAGGGGGATTATGGAACTTGGTAAACTTGTTAAATTAGAAATCGTTGAGTGTGGCTTACGCAAGATTCCACTTTCGACTGCTTTAGTGGAAGAACTTGTTCTTCTGGAGGAATTGAAGATAGAGTCGTGTGAGATGATAGAACAAGTCATAGAGGATGAATCGGAAAAGCAGGAGATATCATTTCGTAATTTAAAGGATCTTCAACTTGGAAGCCTCCCAAAGCTGATCAAGTTCAACTCAGGGGGTTGCAATATCAGATTTCCTAGTCTGCTGAGTTTGAGGATAGAAAAGTGTCCGGAATTGAATGCATTTACTACTGGATTTTTAAGCAAACAGGCGCTAACCATTGAAGTGACATCTGATCGCGTGCCGCGGAATGAGATCATGCATGCATGCCCTAAATTGCGGAAGTTGAAGCTGGCAGAACTGAAAGCTGTGGAGGCGGATTCCTTAAGCAGATTAGAAAAGTTGGAGGCACTGGTTATGAGGAATTGCAGTTTTCTTGGACGCCTGGCAGTACCCACAAACTGTTTGAATCTGAGAGAAATTCAGATTTCTGACTGTAATATTTTGGAAGAGATTTTCGCCGACAAGAAAACTTCCCGTCATTTAGAATCTATCGTTCTTGAAAACCTACCAGTGCTTTCAATTTTCTTCTCCTTGGAGACGTGTGAATTTCCATCCCTCAAAAACCTGAGAATAGTCAACTGCCCTAGGCTTGAGACATCGCCAAGGAACGTCTCCGCTAAAGCAGACAACTTGATGAACAAGCATTCATCAGAACTTCTGTTATTTGAGGAAGTAAATGATGAGGATTCACTAGCTGGTGAGGGTAAAATGAAAATACCACCAGAATTAGAATTACTGGAGTTGGCTGACTTACCAAATATGCAACTATGGAAGCAGGAACCTCATCAAATTACAGTGTTCGTAAATCTTACATCACTTAAAATCATGCGTTGTGGAGGCATCGAAAAACTGTTTTCCATTCGGGTGGCTCAACACCTCTACGTTCTGAAATTGCTAAAATTATATGAATGTGTAAATATGGTTCAAGTTCTTGGAGGTGGAGGTGGAGGTGGAGGAGGAGGAAATAGTAGTAAAGGAGTGGGGGTGTTCAAGAAGTTGGAGACACTTGTCCTCAAACACCTGCCAAGACTCACCAGTTTCTGTGAAGAAGATGATGCTGATTTTGGCGAATTCCCGGAGTTAAAGATGGTTAGAGTGGAGAACGTTCCAAACATGAACACATTTGTGAAGAAGCCTCTCAACACTCCAAAACTGAAACAAGTTCATGTAACGTTTATTACAAAATGCTGGCTACGAGACCTCAACACCACCATAGCATACTTGCACCGAGAACTTGAGCAACTACAATGCGAGGTTTGGGAATCTGACCAGAGCAGCACTGGACAACATACGGATACTGTTGAAAGTTCGTCACAGGCAAATTCGAGATTCAAGGAGGTGGCAGAGATGGAATTGCATGAAGGCGAAGGCGTGCACAGAATGGAATCATGA 5622 0.4102 MAEIAVAIIEKTVMSIVRQVEYVSWYKKNLNELKEQVEELKIVQEVVIHEVKAGRRDGKAIEDVVVRWLNRVDESLQEADKLFKDPRNATAVGSFPNLKSRYLLSRKAKSLAVDIDQLSSAGRFDHVTKTHGEELESRKLMKEEIVSVLRYGNVSIIGIYGLAGVGKTFLAQQVAQQVEGDMFKVVYLTTASQTTLDVDERIMKEEGRILIILDDVWGIIDLQELGIFHLTGRFRVLLISRNQHMLQKNGTQRDFKLEVLDDAESWSLFQSRAGGDVLKDAHLRNIAKQLAQRCAGLPIAIITMAESLKDKGVSYWEEALRILNENDYEKMEDTIYSSVQSSYNQLEGDEVKRVFLLCGVLGPCNILVSDLLKYAIGLGVLKHVNSIDDARSKLDRIFVDLEETSSMLLQHGSPREVNVHALVCDAASLIAFRHHYVFTRNASLKDWPGEDFLARCTQIILKRCDIQRLPQRLDCPNLYFLYLDPNDNLTLEIPHSFFEGMGNLQVLVLIGMTITPSLPASLVSLAKLKTLCFNQCRLQDMAGIGALKSLEILSFFKSSMKELPSEIGRLTQLRMLDLSSSKIEIIPPNIISNLTKLEELYMGAVQEEHILAELMHLTRLAALELQIHGASSLWWCYIIFERLQRYNIVIGDKWECSDSNGSSRLLKLKLYPDTHLEELFKAIVKTAEDLYFEGINGFSNVLNLSGEGLPLLKKLHIRNNSKIQHIVGYRIQTPAFPFPNLKTMILDNLNNLKQICLGPVAINAFETLKLIKVKSCDRLEYLFDIWMFENSPRLVEIEVSECSSMKNIVLLDTDTTSRTAKSILVDSLTLQHLPEISGFFSNERNVVGCPDIPTLFPNSTVHLLALKHLKLISISTIKRLVWMSPSIIQGHLEDLETMKIVECNDLDYLFVIEGSVDDIYDENSLGGLLLKLRKLCLLNLDSLTNIVVYPKNNHWRTLKFRMLNHLTVCRCNQLKFLLPLYVIHDLQQLKSIKISDCGKLEQVCADEKTQTRKSSSNVMKEVLPLLQSLKLSNLPELISICSGAAHVISGSLTQMTVENCPKFIFTFAYKLKGTEEQEPSKKKSKETIVIPSKLENLNLRKVDHLKNMCNYPLFSLMRLTSLQLDNCSKLEYLFSLSMAQELSSLRELKIISCDKIEQIVKRETEERASANTVEFPQVETLVLDQLPKFNGSFSSQDGASVKWVALDTVRVAKCPKIQKSMLGTVDRPLLKKVKVENCSPWEYEDLESNMGYLFEFTDELSKAENLRIEDSNKLKFMEMKLQQSSLRQLKTVEALRCDNELNKFLSILLHRSHKLERLTVERCELLEQVFDLGDLAPDKQGSRFFPNLHTMQLLCLPKLNCVWNKDPRGIMELGKLVKLEIVECGLRKIPLSTALVEELVLLEELKIESCEMIEQVIEDESEKQEISFRNLKDLQLGSLPKLIKFNSGGCNIRFPSLLSLRIEKCPELNAFTTGFLSKQALTIEVTSDRVPRNEIMHACPKLRKLKLAELKAVEADSLSRLEKLEALVMRNCSFLGRLAVPTNCLNLREIQISDCNILEEIFADKKTSRHLESIVLENLPVLSIFFSLETCEFPSLKNLRIVNCPRLETSPRNVSAKADNLMNKHSSELLLFEEVNDEDSLAGEGKMKIPPELELLELADLPNMQLWKQEPHQITVFVNLTSLKIMRCGGIEKLFSIRVAQHLYVLKLLKLYECVNMVQVLGGGGGGGGGGNSSKGVGVFKKLETLVLKHLPRLTSFCEEDDADFGEFPELKMVRVENVPNMNTFVKKPLNTPKLKQVHVTFITKCWLRDLNTTIAYLHRELEQLQCEVWESDQSSTGQHTDTVESSSQANSRFKEVAEMELHEGEGVHRMES 1873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0081 1873 Coils Coil 1808 1828 - -
Lele39g0081 1873 Gene3D Ribonuclease Inhibitor 1086 1483 IPR032675 -
Lele39g0081 1873 Gene3D Ribonuclease Inhibitor 1636 1807 IPR032675 -
Lele39g0081 1873 Gene3D Ribonuclease Inhibitor 851 1075 IPR032675 -
Lele39g0081 1873 Gene3D Ribonuclease Inhibitor 1485 1629 IPR032675 -
Lele39g0081 1873 Gene3D Ribonuclease Inhibitor 559 821 IPR032675 -
Lele39g0081 1873 Gene3D Ribonuclease Inhibitor 402 558 IPR032675 -
Lele39g0081 1873 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 358 IPR027417 -
Lele39g0081 1873 SUPERFAMILY RNI-like 459 806 - -
Lele39g0081 1873 SUPERFAMILY RNI-like 1654 1804 - -
Lele39g0081 1873 PRINTS Disease resistance protein signature 294 308 - -
Lele39g0081 1873 PRINTS Disease resistance protein signature 156 171 - -
Lele39g0081 1873 PRINTS Disease resistance protein signature 568 584 - -
Lele39g0081 1873 Coils Coil 23 50 - -
Lele39g0081 1873 Pfam NB-ARC domain 202 344 IPR002182 GO:0043531
Lele39g0081 1873 Gene3D - 259 347 IPR042197 -
Lele39g0081 1873 CDD AAA 138 219 - -
Lele39g0081 1873 SMART AAA_5 153 261 IPR003593 -
Lele39g0081 1873 Gene3D - 118 206 IPR027417 -
Lele39g0081 1873 SUPERFAMILY RNI-like 1340 1610 - -
Lele39g0081 1873 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1260 1472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0081 Lele-ChrLele39 538998 547213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0081 153 384 WRKY Transcription Factor Family AT5G45050 23.282 1.12e-06 52.0