Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0068 ATGGACGTGGACGGAACTTCTAAACCCAAAGAGGAAAAGCTCTTATTGGTCATGTTAGTGGGTGCACCAGGGAGCGGCAAGTCCACCTTCTGCGAAGAAGTTATGCGTTCTTCTACTCGTCCTTGGATTCGCGTTTGCCAGGATATCATTAAAAATGGGAAAGCAGGAAATAAAGCTCAGTGTCTAAGCAGTGCAGCTGGAGCATTGAAGGAAGGAAAGAATGCATTTATTGACAGGTGCAATCTTGATAGAGAACAGCGTTCAGGATTCGCAGAGCTTGGTGGACCCCAAGTAGATGTGCATGCTGTTGTGCTTGATCTACCTGCAAAGCTTTGTATTTCTCGATCTGTTAAACGATCTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTGGTGAATAGAATGCTTCAGAAGAAAGAGCTGCCCACGTTAAGTGAAGGTTTTAACCGGATAACATTTTGTCAGACTGAGAGTGATGTCAAAGTGGCTCTTAACACATACAGTGCACTTGGGCCACTGGATAACCTTCCACATGGATGTTTTGGCCAGAAAAGTAAAGATCCCAAAGTTCAATTGGATATAATGAAGTTCTTCAAAAAGGCTGAGGTCCCAGTTGTTGCTGAGTCTAGAGAGAATTGCGGTGGCAATTCTACTTCTCAAAGTAATGTGATGATAGATCCCTGTCGTAAAGATATGGAAAATTTTTCATCAAATTCAGATAAAGCCAACATAGAGCCAATGAATGTGGAAAACATCTCAGTTGGCTCCACTGTTTCTCATGTTGATCATGCTTTCTTGCGTGATGCTCCCACTCTGGCATTTCCATCTATTTCAACATCGGATTTCCAGTTTGACCATGAGAAGGCAGCTGAGATTATTGTGGAGAAAGTTGCAGAGTTCTCTAATAAGCTTGCAAATGCTAGATTTGTTTTAGTTGACTTGACTCATGGTTCAAAGATTCTGTCTTTAGTTAAAACCAAAGCTGCTAAAAAGAATTTAGACCCCAGAAAGTTTTTTACCCATGTTGGGGACATTACTTGCCTTAAGTCCACTGGAGGCTTGCACTGTACTGTGATAGCTAATGCTGCCAATTGGCGATTGAAACCTGGAGGTGGAGGGGTTAATGCTGCAATTTTCAAGGCTGCAGGTCCTGTCTTGGAGTCTGCAACCAAAGAACGAGCACAGTTGCTTTTGCCTGGGAATGCTGTTGCTGTCCCTCTACCATCATCTTCTCCTTTGTTTGCTAGGGAGGGGGTAACCCATGTAATACATGTTCTTGGACCAAATATGAACCCACAGAGGCCAGATTGTCTCAATAATGATTACAATAAAGGCTGCAAGATTCTCAGAGAGGCTTACACTTCACTATTTGAAGCTTTTGCATCAATCGTGAGGACTGCAACAGAGCAAAAGAGCAAGAGAGATGCTGATGATGGATCTGAAAAAAGCAAGAAATACAAGGGAAGTCAGGATGATGTTGAAGTGAACTGTAGTGGTACCAAGGTTGTAAACATAGATTCAAGTAATAAAAAAAGTGATGGCAGCTTGAATAAGACATGGGGATCATGGGCTCAAGCTCTTCATCAAATAGCTATGCATCCGGAGAAGCATAAGGACGAATTGCTTGAAATATCCGAAGATGTAGTTGTGCTGAACGATCTGTATCCTAAGGCACAGAAGCACGTTTTGGTGTTGGCGCGAACTAGAGGCCTCGATTGCCTGGCTGATGTTCAAAATAACCACCTTCACTTGCTAAAGAGGATGCATGCTGTGGGTCTAAAATGGACCGAGAAGTTCTTACATGAGAATGCTTCATTAGTCTTTCGTCTTGGATATCACTCGGTTCCATCAATGCGACAACTTCATTTACATGTTATTAGCCAGGACTTTGACTCAAAACATTTGAAGAACAAGAAGCACTGGAACTCGTTCAACACCGATTTCTTTCGTGACTCACTATATGTTATTGATGAGGTCTCTAATAATGGGAAAGTAACCTTGAGAGATGATGACAAGTTGCTGTCCATGGAGTTGAGGTGCCATAGATGTAGAAGTGCACACCCTAACATTCCCAGGTTAAAATATCATATTAGCAGTTGCCAATCTCCTTTCCCTGCTTGCTTGCTTCAAAATGGTCGTTTGGTTCGTGCACAAGGTGAAGTATTGAGTTTGGCTTCTAAAATTTTCGATTCTGAGATTCCGAGGACAGAGCTGAAACTCGAGAATCCAAATTTGAGAATGCTTACTCAGAATCTCACCAGCATTAGGCAATTGTACCTAGATGGTGTCACTATATCAGCTCAGGGACCAGAATGGGGCAATGCTCTGTTATCTCTCCCTAGTCTGCAAGAATTGAGAATGTCAGGCTGCAATGTTTCAGGTCCCATTGATTCTTCCCTTACTAGACTAAAGCTCCTATCGGTAATACATCTTGGTCCGAACAATTTGTCAGCCCCAGTGCCAGACTACTTTGGTGATTTCTCAAATCTGAGAAGATTGCATCTCAGCTCTTGCTGGTTGAGGGGAAGTTTTCCACAGAATATCTTCCGGGTAAAGACATTGACCATCATTGACATATCTTATAATACTGGTCTTAGTGGTTCTTTCCAGAATTTCCCAGTGAATGGATCTCTCCATGCCCTTGTGAATCCTAGTCCCCGTTTGACACTCCTGGACCTTCATGACAACCAACTCCGAGGCTCAATTCCTTTTTTTCCTAATCTTCTTTCCTATTTGGACTACTCATCCAAAAAGTTCAGCTCTGTTTTTCCACCTGACATGAGTGATGATCCCGGTTTAGTGATTTTTCTATCCTTATCAAATAATGCTTGTCATGGCAGCATCCTTGATTCCTTCTGCAAATTTCTGAATCTTCGAGTGCTTGATGTTTCTCACAATAACATTTCAGGTGCAATTCCCCCGTGTTTAATGCCAATGAATGGGACCCTTGCCATACTAACTTTGAGGGAAAACAATCTCACAGGAAAAATACCTGACAAGTTTCCAGCTTGTTGTGCTTTAAGGACTCTAGATGTCAATGGAAATCAATTAGATGGACCAATAACAGATAGAGTCAGCATTAGTAGTAAAGGTCAAGTGGTGAAGAGGGTTAAAATTTTAACCGTCTTCACTGCCATTGACTTCTCATCCAACTTTCTTGAAGGGCGAATACCAGAAGAATTGATGAATTTTAAAGCACTATATATTCTCATTTGTCAAATAATGCTCTCACAGGCCAGATACCATCATATTCAATCATTTGAAGCATATTCGTTCATAGGCAATGATGGGTTATGTGGATCTCCTCTGACACCAAATTGTAGCAGCAAGGGAACACCAAGGAAGTCACGATCATCCTACTCTGAGAGCTCAATTGATTGGAATTTCATAACCGCTGAAGTTGGCATCAATGTCTTTGTGGTAACTGGCCACTATTGCCTTGGCCAACAGCTATCAGCATTGCTTCATTTGAAGAATAGCCTCACTTTCAACCCTTCCAAGTCCCAAAAATTGGTTCATTGGAACCAAAGTTACAGTTGCTTTGAGGGGAATATTCCAGTTGAGATATCTTGGTTAACAAGATTCGATCGTGTATTGGATGAATTTCCAAACGCATCATTATCCTCATTAGAGTTCCTTGATGCTAGTGGAAATAATTTACAAGGGCCTATTCCCTTGTCCATCTTCCATCTCAGAGGGCTTAGAGCTCTCCAACTTTCCTTAAACAAGTTCAATGGCACCATCCATTTGGTTACAACAGTAAAGAGGATGAACATTTTGGAAATACTGGATCTTAGTCATAACCATGAGTTTCCTTGCTTCCTAAATGGCATGTCCACCTTAAAAGTCATAATTTTAAGATCAAACAACTTTCATGGCCCTCTTGATTGCCCACAAAATAGCATTGGAAACTGGAAAACACTTCAAATTGTTGATCTAGCCTCCAATAGTTTTAGTAGTACATTACCAGGATCATTCCTGCAAAATTTGAAAACTTTAATGCTTGATGATGAAGAAAGTTCAAATTTTGGCTATTTGGTGTTTGATATCTTTGATAATGTCAATCCTATGGATATCATGAGTGCGTGGACCCCAATAGCAAACAAAGATCTTGAACTAAAACTATCAAAAATTATAAATATAGGAATGCCACCTAATATGATGAACCACTTATTCTATGATGCTTATGCGGGGCGCTCTTTGAAATCAGAAGTCACCAAGATTCAGTAA 4239 0.4117 MDVDGTSKPKEEKLLLVMLVGAPGSGKSTFCEEVMRSSTRPWIRVCQDIIKNGKAGNKAQCLSSAAGALKEGKNAFIDRCNLDREQRSGFAELGGPQVDVHAVVLDLPAKLCISRSVKRSGHEGNLQGGKAAAVVNRMLQKKELPTLSEGFNRITFCQTESDVKVALNTYSALGPLDNLPHGCFGQKSKDPKVQLDIMKFFKKAEVPVVAESRENCGGNSTSQSNVMIDPCRKDMENFSSNSDKANIEPMNVENISVGSTVSHVDHAFLRDAPTLAFPSISTSDFQFDHEKAAEIIVEKVAEFSNKLANARFVLVDLTHGSKILSLVKTKAAKKNLDPRKFFTHVGDITCLKSTGGLHCTVIANAANWRLKPGGGGVNAAIFKAAGPVLESATKERAQLLLPGNAVAVPLPSSSPLFAREGVTHVIHVLGPNMNPQRPDCLNNDYNKGCKILREAYTSLFEAFASIVRTATEQKSKRDADDGSEKSKKYKGSQDDVEVNCSGTKVVNIDSSNKKSDGSLNKTWGSWAQALHQIAMHPEKHKDELLEISEDVVVLNDLYPKAQKHVLVLARTRGLDCLADVQNNHLHLLKRMHAVGLKWTEKFLHENASLVFRLGYHSVPSMRQLHLHVISQDFDSKHLKNKKHWNSFNTDFFRDSLYVIDEVSNNGKVTLRDDDKLLSMELRCHRCRSAHPNIPRLKYHISSCQSPFPACLLQNGRLVRAQGEVLSLASKIFDSEIPRTELKLENPNLRMLTQNLTSIRQLYLDGVTISAQGPEWGNALLSLPSLQELRMSGCNVSGPIDSSLTRLKLLSVIHLGPNNLSAPVPDYFGDFSNLRRLHLSSCWLRGSFPQNIFRVKTLTIIDISYNTGLSGSFQNFPVNGSLHALVNPSPRLTLLDLHDNQLRGSIPFFPNLLSYLDYSSKKFSSVFPPDMSDDPGLVIFLSLSNNACHGSILDSFCKFLNLRVLDVSHNNISGAIPPCLMPMNGTLAILTLRENNLTGKIPDKFPACCALRTLDVNGNQLDGPITDRVSISSKGQVVKRVKILTVFTAIDFSSNFLEGRIPEELMNFKALYILICQIMLSQARYHHIQSFEAYSFIGNDGLCGSPLTPNCSSKGTPRKSRSSYSESSIDWNFITAEVGINVFVVTGHYCLGQQLSALLHLKNSLTFNPSKSQKLVHWNQSYSCFEGNIPVEISWLTRFDRVLDEFPNASLSSLEFLDASGNNLQGPIPLSIFHLRGLRALQLSLNKFNGTIHLVTTVKRMNILEILDLSHNHEFPCFLNGMSTLKVIILRSNNFHGPLDCPQNSIGNWKTLQIVDLASNSFSSTLPGSFLQNLKTLMLDDEESSNFGYLVFDIFDNVNPMDIMSAWTPIANKDLELKLSKIINIGMPPNMMNHLFYDAYAGRSLKSEVTKIQ 1412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0068 1412 MobiDBLite consensus disorder prediction 471 495 - -
Lele39g0068 1412 Gene3D Ribonuclease Inhibitor 700 1113 IPR032675 -
Lele39g0068 1412 Gene3D Ribonuclease Inhibitor 1149 1367 IPR032675 -
Lele39g0068 1412 Pfam Scavenger mRNA decapping enzyme C-term binding 531 643 - -
Lele39g0068 1412 Gene3D Leucine Aminopeptidase, subunit E, domain 1 323 467 IPR043472 -
Lele39g0068 1412 PANTHER APRATAXIN-RELATED 275 703 - -
Lele39g0068 1412 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 159 IPR027417 -
Lele39g0068 1412 Pfam AAA domain 16 141 - -
Lele39g0068 1412 SUPERFAMILY Macro domain-like 265 316 IPR043472 -
Lele39g0068 1412 FunFam aprataxin isoform X2 524 704 - -
Lele39g0068 1412 SUPERFAMILY HIT-like 521 687 IPR036265 -
Lele39g0068 1412 SUPERFAMILY L domain-like 752 1339 - -
Lele39g0068 1412 ProSiteProfiles Macro domain profile. 328 566 IPR002589 -
Lele39g0068 1412 Gene3D Leucine Aminopeptidase, subunit E, domain 1 259 322 IPR043472 -
Lele39g0068 1412 SMART YBR022w_8 340 479 IPR002589 -
Lele39g0068 1412 FunFam Transcription factor bHLH140 321 468 - -
Lele39g0068 1412 ProSitePatterns HIT domain signature. 612 630 IPR019808 -
Lele39g0068 1412 Gene3D - 4 171 IPR027417 -
Lele39g0068 1412 Gene3D - 521 699 IPR036265 -
Lele39g0068 1412 Pfam Leucine Rich Repeat 960 979 IPR001611 GO:0005515
Lele39g0068 1412 FunFam Transcription factor bHLH140 4 172 - -
Lele39g0068 1412 SUPERFAMILY Macro domain-like 323 461 IPR043472 -
Lele39g0068 1412 MobiDBLite consensus disorder prediction 471 494 - -
Lele39g0068 1412 Pfam Macro domain 363 438 IPR002589 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0068 Lele-ChrLele39 451524 463599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0068 13 721 C2H2 Transcription Factor Family AT5G01310 60.333 0.0 866