Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0066 ATGGAGTACAACATTCCTCCTACCAGCAACCTTACCTCATCAACAACGTCATCTTCGAAGGCGAAGAGAAAGAGCAGGAAGAAAAGTAAGGGAGGAGCGAAGCTTTCCACTAATCCACAGAGCGTGGCAGCACGAGAACGAAGGCATCGAATCAGCGATCGGTTCAAGATCTTGCAGAGCATGGTCCCTGGTGGGAGTAAGATGGACACGGTATCGATGTTGGAGGAAGCGATTCATTACGTGAAGTTTCTGAAAACTCAGATATGGCTCCACAAAACCATGATCAACTCTGTTGATGATGACTACCTTCCATTTCCCAACCATGAACAGTTCCCTTCTGTTCAACAAAACCCATCTTCTTCAGTGCAGAATCTTACACAGTACCACTGTAACAGTATAGCTACTTCCAAAATGAAGCTGCAACAACAATATTGGACGCCAATATGA 447 0.4519 MEYNIPPTSNLTSSTTSSSKAKRKSRKKSKGGAKLSTNPQSVAARERRHRISDRFKILQSMVPGGSKMDTVSMLEEAIHYVKFLKTQIWLHKTMINSVDDDYLPFPNHEQFPSVQQNPSSSVQNLTQYHCNSIATSKMKLQQQYWTPI 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0066 148 MobiDBLite consensus disorder prediction 1 19 - -
Lele39g0066 148 SMART finulus 41 90 IPR011598 GO:0046983
Lele39g0066 148 Gene3D - 39 93 IPR036638 GO:0046983
Lele39g0066 148 FunFam Transcription factor LAX PANICLE 38 101 - -
Lele39g0066 148 Pfam Helix-loop-helix DNA-binding domain 45 84 IPR011598 GO:0046983
Lele39g0066 148 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 7 141 IPR045843 GO:0003700|GO:0006355
Lele39g0066 148 MobiDBLite consensus disorder prediction 1 48 - -
Lele39g0066 148 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 35 84 IPR011598 GO:0046983
Lele39g0066 148 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 40 95 IPR036638 GO:0046983
Lele39g0066 148 CDD bHLH_AtIND_like 36 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0066 Lele-ChrLele39 442989 443435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0066 27 105 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 48.101 4.44e-21 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele39g0066 HLH 4.1e-08 No_clan