LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele39g0058	ATGCTTAACACAACCAATACAATCAAACATAAAGTTTCTTCCTTTAGCACATCCTTTGTTTTCTCCATCGTCTCTTCAGCTTCTGGCACTGGAGGCTTTGGCTTTGCTTTCGTCATAGCTCCTACAACTCAATTTCCATGGTCAAGCCCTGGCCATCTTCTTGGTCTTGTCAACTCCTCCAATGATGGGAATGCTTCAAATCACCTTTTTGTAGTCGAATTTGATATGGACTCCATGTTTGTTGGTTTCTCAGCTTCAACTGGGGAAAGTAAAGCAAGCTCCCATTACATTCTGGGATGGAGCTTTTCAAGGAATGTTTCTTCTGCTGCACTCAACCGTTTCAAGCTTCCAGAGCTACCGACAAAGGAGAATAATGGTCCAAGTTCAACTTCTTTCCCTTGGGTCAAACTTGCCATTGGAGTTTTATCTGCTGTAAGAATAATATTGTCGGTTTCCTTGAGTTCAGTAACATTGTACAGCAGGACAGGGAAAGCATCCACAAGTTCTGATGTGTATGCTTATGGGGTCTTGCTTCTTGAAGTTGTTAGTGGGAGGAGACCTATTGATCAGTCAGGGCAGTTTTTCTTGTTAGATTGGGCTATAGAGAATCACGGATTGGATCAGATTCTTGAAGTGTTTGATCCAAAGTTGAATTCAGTTTATGATCAAGAGGTGGAATTGATTCTGAAACTGGGCCTTCTCTGTGCTCAAAGCAGAGCAGATTTGAGACCAACCATGAGACAAGTGACAAGGTATCTTAACTTTGATGATCCTGTTCCAGTTATTGAGTATTGGAGGGGGCAGATTAATTCTGGAAGTAGCAGAATGAGCTCTGGTTTTCTGGAAATTGTGTCTGCAAGTACTGTCTCAACTTCTTATAACTTATCATCCATTAATATTAGTTTATCACTATTGCCCGAGTTCATGGGGCCTTTAAACCCGACTAAGCAGATATCTCAGGCCTCTGGTATTACTAGCATTCCATATGTGGAAGGCCCCTAG	1002	0.4192	MLNTTNTIKHKVSSFSTSFVFSIVSSASGTGGFGFAFVIAPTTQFPWSSPGHLLGLVNSSNDGNASNHLFVVEFDMDSMFVGFSASTGESKASSHYILGWSFSRNVSSAALNRFKLPELPTKENNGPSSTSFPWVKLAIGVLSAVRIILSVSLSSVTLYSRTGKASTSSDVYAYGVLLLEVVSGRRPIDQSGQFFLLDWAIENHGLDQILEVFDPKLNSVYDQEVELILKLGLLCAQSRADLRPTMRQVTRYLNFDDPVPVIEYWRGQINSGSSRMSSGFLEIVSASTVSTSYNLSSINISLSLLPEFMGPLNPTKQISQASGITSIPYVEGP	333

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele39g0058	333	Gene3D	-	78	116	-	-
	Lele39g0058	333	PANTHER	-	162	255	-	-
	Lele39g0058	333	Gene3D	-	2	77	-	-
	Lele39g0058	333	Pfam	Legume lectin domain	9	76	IPR001220	GO:0030246
	Lele39g0058	333	Pfam	Legume lectin domain	78	113	IPR001220	GO:0030246
	Lele39g0058	333	Gene3D	Transferase(Phosphotransferase) domain 1	138	262	-	-
	Lele39g0058	333	SUPERFAMILY	Concanavalin A-like lectins/glucanases	6	121	IPR013320	-
	Lele39g0058	333	SUPERFAMILY	Protein kinase-like (PK-like)	161	261	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele39g0058	Lele-ChrLele39	401787	403855	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele39g0058	3	75	Receptor kinase-like Gene Family	AT5G01540	45.205	6.42e-12	64.7

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lele39g0058		Lectin_legB	1.2e-18	CL0004