Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0057 ATGGCCGCATCATCATCATCATCGTTAACACTTGACTTTCTCCTCCATCTAATTCTTCTTTCCCTTCTAGTGGCAGCCAAGGCTCAAGAAGGGACCCAGTTTTCCTACGAATTCAATGGCAATGGAAGTCTAGTCCTTGAGGGAGTTGCTGAAGTTACGAGTGATCATATGCTTAAGCTCACCAACACATCCAACCATATTGTAGGCCGTGCTTTCCATTCCCGAAGCATTCAAATGTTTCACAATAATTCAGACCAACGTCAAAAAGCTTCTTCCTTTAGCACATACTTTGTTTTCTCCATGGTCCCCTCAACTTCTGATCCTGGTGGCTTCGGCCTTGCTTTCGTCCTCGCACCAACTATCGAGATGTTTCGAGACGCTCAAGCTGGGCACCATCTTGGTATTTACAGCGCTTCTAATGGTGTGAATGAGACTCACATCTTCGCAGTGGAATTTGATACGGTGAATGGCTCCGACAAAGGTGAGTCAGACACAGTAGGGAATGATGTTGGGATCAATGTTAATGGAACAGAGTCAGATATCACTAAACCAGCTGTTTACTTGGGGAAAGATTCTAACTGGGTTAATTTCAGTATGGAGCAATCTGAAGCTGTACAAGCTTGGATAGATTATGATGGTGACAATAAAACCGTGAACGTGACCGTAGCTCCGCTATCAGAGCCTAAACCTTCCACACCACTTATATCAAATCATTCCATTAACCTTACAACTGTTCTAAAAGAACAGATGTATGTCGGTTTCTCAGCATCAACAGGTGGGGCAAGTAAAGCAAGCTCTCATTACATTCTGGGATGGACCTTTGCAGTCAATGCACCTGCTCCTTTGCTTGACATTTCCAGGCTTCCAAGCCCACCAGCAAAAGTGAAAGACCCTTCCTCTTTTCCTTGGGTCAACTTTGCCCTAGGACTTTTGTCTGCTTTAACCTTGATATTGTTGCTTTCTTTGTGTTCTGTAACATTGTACAAGAAGTACACCAATTTTGAAGCTCTTGAGGATTGGGAACTAGATTGTCCCCACAGATTCAGATACAGAGATCTTCACACAGCAACGAAAGGTTTCAAGGAGAGTGAGCTAATCGGAGTTGGAGGCTTTGGTGCTGTCTACAAAGGTGTCTTACCTTCCACAGGAACTGAAGTTGCTGTGAAGAGGATTGTTCGTAGTCCAATCCAAGGAATGAGGGAATTTGCAGCTGAGATTGAAAGCTTGGGAAGGTTAAGACACAAGAATTTAGTCAATCTTCAAGGATGGTGCAAGCGAAAGAATGATCTTCTTCTAATCTATGACTTCATCCCAAACGGAAGCCTTGACTCACTACTCTTCAAAAAAAGCCATGTATTGAACTGGGAGCAAAGGTTCAATATCATCAAAGGCATAGCTAATGGGCTATTATATCTTCATGAAGATTGGGAACAAGTGGTGGTCCACAGAGACATCAAAACCAGCAATATCCTCATAGATGGAGATTTAAATGCTCGTTTGGGCGATTTTGGCCTCGCTAGGCTCTATGATCATGGTGAAGCATCACACACAACCAATGTGGTTGGGACAATTGGGTACATCGCTCCAGAATTGACTCGCACAGGAAAGACATCCACAAGCTCTGATGTGTATGCTTTTGGGGTTTTGCTCCTTGAAGTTGTTAGTGGGAGGAGACCGATTGGGTCAGAACAATTCTTTTTGGTGGATTGGGTTGTGGAGAATCACAATATGGGCCAGATTCTTGAAGTGGTTGATCCCAAGTTGGGGTCAGATTATGTTGAGGAAGAGGTAGAATTGGTTCTGAAACTGGGTCTTGTCTGCGCTCAGCATCATGCAGATTCAAGGCCCACCATGAGACAAGTGATGAGGTACCTGAACTTTGATGACCCTCTTCCAGAGATTGGGGATTGGAGGAGACAGACAGATTCAGATAGTGGAAGAATGACCCTGGGTTTCTTAGAAATTGAATCGTTAAGTAGTACGTCAAATTCATATAACTTCACCTCTAATAGTAGCATAATGAATAGCAGGCCCATCCAAGCTTGTAGATAG 2052 0.4371 MAASSSSSLTLDFLLHLILLSLLVAAKAQEGTQFSYEFNGNGSLVLEGVAEVTSDHMLKLTNTSNHIVGRAFHSRSIQMFHNNSDQRQKASSFSTYFVFSMVPSTSDPGGFGLAFVLAPTIEMFRDAQAGHHLGIYSASNGVNETHIFAVEFDTVNGSDKGESDTVGNDVGINVNGTESDITKPAVYLGKDSNWVNFSMEQSEAVQAWIDYDGDNKTVNVTVAPLSEPKPSTPLISNHSINLTTVLKEQMYVGFSASTGGASKASSHYILGWTFAVNAPAPLLDISRLPSPPAKVKDPSSFPWVNFALGLLSALTLILLLSLCSVTLYKKYTNFEALEDWELDCPHRFRYRDLHTATKGFKESELIGVGGFGAVYKGVLPSTGTEVAVKRIVRSPIQGMREFAAEIESLGRLRHKNLVNLQGWCKRKNDLLLIYDFIPNGSLDSLLFKKSHVLNWEQRFNIIKGIANGLLYLHEDWEQVVVHRDIKTSNILIDGDLNARLGDFGLARLYDHGEASHTTNVVGTIGYIAPELTRTGKTSTSSDVYAFGVLLLEVVSGRRPIGSEQFFLVDWVVENHNMGQILEVVDPKLGSDYVEEEVELVLKLGLVCAQHHADSRPTMRQVMRYLNFDDPLPEIGDWRRQTDSDSGRMTLGFLEIESLSSTSNSYNFTSNSSIMNSRPIQACR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0057 683 FunFam L-type lectin-domain containing receptor kinase S.4 437 637 - -
Lele39g0057 683 CDD STKc_IRAK 366 626 - -
Lele39g0057 683 SMART serkin_6 360 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0057 683 Pfam Legume lectin domain 33 288 IPR001220 GO:0030246
Lele39g0057 683 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Lele39g0057 683 Gene3D Transferase(Phosphotransferase) domain 1 437 630 - -
Lele39g0057 683 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Lele39g0057 683 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 294 IPR013320 -
Lele39g0057 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Lele39g0057 683 ProSiteProfiles Protein kinase domain profile. 360 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0057 683 Gene3D - 29 279 - -
Lele39g0057 683 PANTHER - 25 627 - -
Lele39g0057 683 Pfam Protein kinase domain 360 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0057 683 CDD lectin_legume_LecRK_Arcelin_ConA 32 277 IPR001220 GO:0030246
Lele39g0057 683 FunFam Lectin-domain containing receptor kinase VI.3 345 436 - -
Lele39g0057 683 SUPERFAMILY Protein kinase-like (PK-like) 344 629 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0057 Lele-ChrLele39 397710 399846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0057 38 651 Receptor kinase-like Gene Family AT5G01560 50.159 0.0 595
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele39g0057 Pkinase 4.9e-50 CL0016