Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0041 ATGACCCCCCTACCCCGCTTATCCATACTGAACCTTTCTCGTATAGTCTTTTTCTTCATCTCTAATAACACCATCACAGCTGCCAATGCCATGGAGCCTCCCGCAGGCAAGCAAGGTTCTCTCACGAATGTTCTCGTCCGGTTGCTCCTCTTCGGTGTCTTCCTCATGCTCCTGAGATTCGCTTACGTCATCACTATCACTGGCTACCTCACACCTGAGTCCAAGTCGTTGTGCGTGGAGACGTCTACAGGAAGCGACGTCTTCACATTGAAGGAGAATGGCATTTTGGATTCCATCGGCATCTCGAAGAAAACCGGGGAGGCTTATCGTTTACCGCTGGGAGATAACATGTTTGACTTCGTCTTCTCTGTCGAAGGTGGGCTCGACAAATCCGCACGGCCGTCGGAATTTGCCTCTGAGATTGCTCGGACGGTTAAACCCAAAGGGTTTGTCGTGTTCCATGTAAGGGCAAACGACACTTGCAGTTTCAATTCATTCCTTGGTTTATTTAATTGTTGCAGAGTAGTAAAATCGAGTGATAGAGATGGGTTCGATTCTTCAATGCCCTATATACACGAAATCGTTCTTAGGAAAGAGGGTGATGGTATTATTGATCATGAAAACGAGAAGCAGAATTCCAATGGCAATTGCTCTGTTTTAGGGTATAAACAAGAATTGGTGGCAAAGGCTGAGCCTCTGATTGCTGAGGAGCCACTGAAACCTTGGATATCATTGAAGAGGAACATAAGGAATGTCAAGTACCTACCATCAATGGTTGATATCAGCTTTAAGAATAGGTATGTGTATATAGATGTTGGAGCTCGAAGTTATGGCTCTAGTATAGGAACTTGGGTGAAGAATGAGACCTTAACCTTTGAAATCCATAGAGAGCCTGGTAAACAAGTGGATAGTAAAGGTAGAGGAACGGGTAGGAGCCAACCTCTGCAATTTCCCGGTGATTGTGATGGGGAAGTGGAGAAGATCCAAGGGTTTGATTTTGTGGAATGGTCGAAGAACACAGTTTCAAAGAATGATTTTGTTGTGATGAAAATGGACGTGGAAGGTGGCAGAGATGTTGTCCTGGGCAGAGGAGTTCCAAGTATGACAAAACAGATGAACAGTGCTTGTCACTGTTCTATTTTCTTAGACGAAGTTATTGCATATATTTCTAGCCATGTCTACCGTTTTTCGAGACTTTTATCAGTTTTCCGTTACTTCCTTCCCCAACCGCCTCTTAATCGATTCGAGCTTTTCCGGTTTCCAGCCTTTGTCCACTCTCTCGCAGATTTCCTCGAGAACTTCCGACTGCAATTTCGTAAGGTCCCCTTGGTTTTGGAATTACCATCGTTGGGCCTTTCGATATGGGGGGTTGTTGCAGTTGTGAGATTTCTTGTGGAGGCAAGATTAAGAGGTTCCTCTAAGTTTATATCAATGTACTGCCAACAAGGAAGTAAAGGGATTAACCAAGATGCATTAACAGTTTGGGAGGGCCTTAATGGAGAAAAAGGCATGATCTTCTGCGGGGTGTTTGATGGTCATGGTCCTCTTGGGCACAAGGTTTCACAATATATACGTGACAATCTTCCCGCAAAACTCTCTGAATCAATCAAAATGACTCAACAGAACAAGGTCAGCAAACTCTGGGATCCTTATCCTCGAGAAAGAAGCCGCCATGTTAATAATGACCAAAACATGTCCCCTGCTTCATGGGAGCGCAGCCTTGTCAAATCCTTCAATGAGATGGATGGAGACGTTGCTCGAGATATCAACACCGACAGCTTTTCCAGCGGTACCACTGCTGTAACTGTAATTCAACAGGGAGACCAGCTGATAATTGCAAATTTGGGAGATTCTCGAGCAGTTCTTTGCACGAGAGGAGATAATGACGAGCTTAATCCTGTGCAACTCACTGTGGACTTGAAACCTGATATTCCAAGCGAAGCCACGAGAATCCAAAATTGTGAAGGCAGAGTTTTCGCTGCAGCAGAAGAATCACAAGTATACAGAATATATATGCCTGATGACGACGCTCCTGGACTAGCTATGTCAAGAGCCTTTGGAGATTTCTGCCTGAAAGATTATGGCCTCATCTCAGTTCCTGATGTCTTCCATAGAAAAATAACAGAGCAGGATGAATTCGTAGTGTTGGCAACAGATGGGATTTGGGATGTGCTATCAAACGCGGAAGTGATAAGTATAGTTGCTTCAGCGCCAAGCAGGTCCATGGCAGCAAAACTGTTAGTAAGGCATGCTGTTTCTGAATGGAGACACAGGTATCCTAATGCAAAGATCGATGATTGTGCAGTGATATGCTTGTTCCTGCATGAACCGCCTGCTTTACCTGATTCTCCATCTGCTAGGAGCAACTTAAATCAAAGGAGGCAACTCAGTCCCCGTGTTGCCAAACCCACTAGAAATGATGGCACTGAAAGTTGGTTAGATGATGGCAAGAGTTCTATAATAACATTAGGGCAAGAATTGGATGCTAGTTCAAAATTGTCCATAGCCAACTCTGTGGCATATTCAAAATATCCACTACTCACTACGGTTTTGAGTAGAAAATCTTCTCAGTGCGTTGATGGGGTTGAAGTTCATTAG 2598 0.4442 MTPLPRLSILNLSRIVFFFISNNTITAANAMEPPAGKQGSLTNVLVRLLLFGVFLMLLRFAYVITITGYLTPESKSLCVETSTGSDVFTLKENGILDSIGISKKTGEAYRLPLGDNMFDFVFSVEGGLDKSARPSEFASEIARTVKPKGFVVFHVRANDTCSFNSFLGLFNCCRVVKSSDRDGFDSSMPYIHEIVLRKEGDGIIDHENEKQNSNGNCSVLGYKQELVAKAEPLIAEEPLKPWISLKRNIRNVKYLPSMVDISFKNRYVYIDVGARSYGSSIGTWVKNETLTFEIHREPGKQVDSKGRGTGRSQPLQFPGDCDGEVEKIQGFDFVEWSKNTVSKNDFVVMKMDVEGGRDVVLGRGVPSMTKQMNSACHCSIFLDEVIAYISSHVYRFSRLLSVFRYFLPQPPLNRFELFRFPAFVHSLADFLENFRLQFRKVPLVLELPSLGLSIWGVVAVVRFLVEARLRGSSKFISMYCQQGSKGINQDALTVWEGLNGEKGMIFCGVFDGHGPLGHKVSQYIRDNLPAKLSESIKMTQQNKVSKLWDPYPRERSRHVNNDQNMSPASWERSLVKSFNEMDGDVARDINTDSFSSGTTAVTVIQQGDQLIIANLGDSRAVLCTRGDNDELNPVQLTVDLKPDIPSEATRIQNCEGRVFAAAEESQVYRIYMPDDDAPGLAMSRAFGDFCLKDYGLISVPDVFHRKITEQDEFVVLATDGIWDVLSNAEVISIVASAPSRSMAAKLLVRHAVSEWRHRYPNAKIDDCAVICLFLHEPPALPDSPSARSNLNQRRQLSPRVAKPTRNDGTESWLDDGKSSIITLGQELDASSKLSIANSVAYSKYPLLTTVLSRKSSQCVDGVEVH 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0041 865 MobiDBLite consensus disorder prediction 784 804 - -
Lele39g0041 865 SMART PP2C_4 466 772 IPR001932 -
Lele39g0041 865 Pfam Methyltransferase domain 104 153 IPR013216 GO:0008168
Lele39g0041 865 CDD PP2Cc 475 774 IPR001932 -
Lele39g0041 865 Gene3D Vaccinia Virus protein VP39 93 167 IPR029063 -
Lele39g0041 865 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 103 163 IPR029063 -
Lele39g0041 865 ProSiteProfiles PPM-type phosphatase domain profile. 475 774 IPR001932 -
Lele39g0041 865 Pfam Protein phosphatase 2C 501 753 IPR001932 -
Lele39g0041 865 SUPERFAMILY PP2C-like 469 777 IPR036457 -
Lele39g0041 865 MobiDBLite consensus disorder prediction 783 813 - -
Lele39g0041 865 Gene3D - 467 776 IPR036457 -
Lele39g0041 865 PANTHER METHYLTRANSFERASE 283 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0041 Lele-ChrLele39 307259 312343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0041 468 778 PP2C-type Phosphatase Gene Family AT5G01700 54.403 1.52e-112 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele42g0204 42 1681083 1681991 Lele39g0041 39 307259 312343 CCT
Lele43g1152 43 19902263 19903192 Lele39g0041 39 307259 312343 CCT
Lele44g1143 44 20054743 20055650 Lele39g0041 39 307259 312343 CCT
Lele37g1384 37 22621594 22623799 Lele39g0041 39 307259 312343 hybridization