Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0024 ATGTACATGAAACTCCTGTATTCTAGGTTACCTGGCTGCACATTTCGAAGATCATTATGGGATCATAGCCCAGAAAAGCTACAGAAAACTATGACTGCTAAGAACTCTTCCAACCCTGATCACTCAGGCTCAGGTTCTAGGGAGAACATCACGGGGAACAAATTGGCGAAGTTGGTAGACTTTTCTGAAATGAGCAAGGGCCCTCAAGATCCTCCTGGCCATTGGTTAGTTACTGGTGGGAAGCTTGGCGTGGAGAAAGGGAAAATTGTTTTGAGATTTCGCAAATTCTTCGTCTTCCGCCTCAATTCACATCGCCCTGCGCCAAAATCTCCCCTATTGCGCCTAGGGCTCATCCGAGCCAGGGTCCTCGATGTCATACAGAAATTTCAATCTCGAATCACTTCGAAGAACCGAGCCACTTTTGGCAATGGAGTATGGACTGATGAACAGCCAAAGGATCTGATACGTACTGGGTTTTGGGTGTTGCTGGCATTCTTAGTTCAAGTTCAACATGTTTGGAAGGAATATGGGAAGGGAGTGTTCCTCATAATACTCGCTTCCATGGGCTTTATGGGTGTTGCGTGGATGACGAAGGGTAAGAGGGCAAAACCTAGGAAATCGATTCACAAATTTTTGCATGAGCTGCGTCCTCTCAGTTTTATACAGCAGACAAGCTCTGGGGACAGGATGGGGTGTTTTACAGTCTTGAAGAGTAAGAAGAAGAAGTCCGAACAGATCAAGAATGTGAAACGGGTCAACCATAAAGAAAATTTACCTGCTGCAGTACTACCTGAACCTCAAACTCATACGCGCTCACTGCAGTCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCAACCCATTAATAACATCACCTACAGTAGAATACGAGCATTATCTGCTCCATCAACTCTTGATGCAGCTGAGCAAGATACTTTGTCATCTGTTGAGTATGAGGAACAAGATGAGTCAAAATACCGGGCTGGATCAATAAAGGAGCAGCGCTCATCCAGTCCACAACCTTTACCACTCCCATGTCCTCAGTCATGTGGTTCATTAAAGGCAACAAGTAGCTTTAAGTCTGTCACAGCTAGTGGTCCCCTCTATGCTTCGGGTCCTTTGCCACTGCCACCTAGTGGATCACTTCGAAACTTTACATATGAAGAAATTTCTGCTGCTTGCCACAGTTTCTCTTCAGATAGGTGCATGTCAGAAGGTCTTTCTTCCATCATATTTAAAGCTTCTTTCGGTGATGAGGCTTCAAGTTCGAAGAAGTTTGAAGCCACTGTCACTCGCCTTCATCCATCTGCTCAGGGCTTAAGGGAATTCGTGAATGAGGTTAATATCATTGCATCTTTGCAACACCCAAACCTTTGTAAATTGCTTGGTTTTCATGCATTTGAGGGTTCAGAACAGAGAATGTTGGTTTATGAGAGGCTATATCATGGAAGCTTGGACCGCCTATTGCATGGGAGATCTGATGGCCCACCTATTGATTGGAATACAAGGATGAAAATTGCTTTATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAACTGCCAATATTCAGATTGACAAAGATTTCAGCGCAAAGCTTTCAGGTTATGGTTGTGTTGGACATATTCCTGAGGAAGAGGTTTCGAGCAATTCAACGGCTGTTGGAAACCTATCTGTAGAGACTCTGGAAAGAGGAATGCTCACTCCAAAGAGCAACGTTTGGAGCTTTGGAATTGTTCTTCTGGAGTTACTTACTGGAAGAAAGAATCTTGACAGCCGTCACAGCAAAGAAGAGAGGAACTTAGTGAAGTGGAGTCGGCCTTTCCTTGCAGATGATTGTCGATTGTCATTGATCATGGATCCTCAACTTAAAGGCCGGTTTCCGTCCAAAGCAGTGAGGACAGTATCTGACATTGCACTTAGGTGCCTTCAAAACGAACCATCAGAAAGACCCACCATGAGAACTGTGGTTGAGCATCTCAGAAAAATACAGGATATGAAGCACTCTTGTCGGTTTCCACTGCGAGAGCCTGCGGCAATTTCGGGAAAACAGATGTCAAGGTCACCAAGTCTTAACGGTATCATCAGTCCTGCGCCTAGATTGAGTTTCTCACCGTCACCGCCTTCAGCGGCCAGACCGTCTATTTCACCTCCAAGGTGGTCTGGTGTGCCCCTCTTGCTTCCTCCCCGTGCATGTTCCTCCACCCTTTCATTGGAGGAGCTTGATCAGCAAGAATCCCGAAAGCCATCATCCCGTGTCTCCAGGAGGGCTAGTGTGGAAGGATTTTGA 2331 0.456 MYMKLLYSRLPGCTFRRSLWDHSPEKLQKTMTAKNSSNPDHSGSGSRENITGNKLAKLVDFSEMSKGPQDPPGHWLVTGGKLGVEKGKIVLRFRKFFVFRLNSHRPAPKSPLLRLGLIRARVLDVIQKFQSRITSKNRATFGNGVWTDEQPKDLIRTGFWVLLAFLVQVQHVWKEYGKGVFLIILASMGFMGVAWMTKGKRAKPRKSIHKFLHELRPLSFIQQTSSGDRMGCFTVLKSKKKKSEQIKNVKRVNHKENLPAAVLPEPQTHTRSLQSAPPSFRTRVKPIQPINNITYSRIRALSAPSTLDAAEQDTLSSVEYEEQDESKYRAGSIKEQRSSSPQPLPLPCPQSCGSLKATSSFKSVTASGPLYASGPLPLPPSGSLRNFTYEEISAACHSFSSDRCMSEGLSSIIFKASFGDEASSSKKFEATVTRLHPSAQGLREFVNEVNIIASLQHPNLCKLLGFHAFEGSEQRMLVYERLYHGSLDRLLHGRSDGPPIDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEVSSNSTAVGNLSVETLERGMLTPKSNVWSFGIVLLELLTGRKNLDSRHSKEERNLVKWSRPFLADDCRLSLIMDPQLKGRFPSKAVRTVSDIALRCLQNEPSERPTMRTVVEHLRKIQDMKHSCRFPLREPAAISGKQMSRSPSLNGIISPAPRLSFSPSPPSAARPSISPPRWSGVPLLLPPRACSSTLSLEELDQQESRKPSSRVSRRASVEGF 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0024 776 MobiDBLite consensus disorder prediction 752 776 - -
Lele39g0024 776 Gene3D Phosphorylase Kinase; domain 1 380 480 - -
Lele39g0024 776 MobiDBLite consensus disorder prediction 315 349 - -
Lele39g0024 776 Gene3D Transferase(Phosphotransferase) domain 1 482 688 - -
Lele39g0024 776 MobiDBLite consensus disorder prediction 29 50 - -
Lele39g0024 776 SUPERFAMILY Protein kinase-like (PK-like) 377 684 IPR011009 -
Lele39g0024 776 PANTHER OS01G0588500 PROTEIN-RELATED 326 678 - -
Lele39g0024 776 MobiDBLite consensus disorder prediction 694 735 - -
Lele39g0024 776 MobiDBLite consensus disorder prediction 697 713 - -
Lele39g0024 776 Pfam Protein tyrosine and serine/threonine kinase 406 674 IPR001245 GO:0004672|GO:0006468
Lele39g0024 776 ProSiteProfiles Protein kinase domain profile. 399 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele39g0024 776 MobiDBLite consensus disorder prediction 28 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0024 Lele-ChrLele39 161853 168883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0024 378 678 Receptor kinase-like Gene Family AT4G02010 37.908 5.47e-56 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Lele39g0024 PK_Tyr_Ser-Thr 1.5e-25 CL0016