Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele39g0018 ATGGAGAATCTTCCGTCGGATCGTATAAAGGCAGTACATGAACTGGAGAGGGGCCGTGAGTTCGCCACCCAGCTTCGCCGGCTCGTTCTCAACTCCAACGGGGAAGGAGATGGCAATGGCACAACGCCGTCTGCCCAAGATCTTGCTGACAAGGTGGTGACCTCCTTTTCCAACACCCTTTTGCTCTTGAACCTGCCCTCTCGCGATTCCCAGGTACAACAATATTCTTCTTGTTTGCTTCCCGCTAAATCCGACGACTCTGAAGATAGCTGCAAGAGCACTTCCGCCTTTAAGGAAAGAAGAGGTTCCTATAAGAGAAGGAGAATATCACAAACATCGGAGATAGACTCCGAAACTCTGATTAATGATGGCCACGCGTGGAGAAAGTATGGTCAAAAGAATATAATGAATGCCGCATACCCGAGGAACTACTTCAGGTGCAGTCACAGGTTTGACCAGGGATGCCAAGCCACCAAACAGGTGCAGAGAATTCAAGAGAAGCCTGAGCAGTACAGGACAACTTACTATGGCGATCACACCTGCAACAGGAACTCGTTGAACAACGAGATCATTTTGGATGCTAATCACCCTTCCATATTAATCAGTTTTGAAAATAACCTCCCCACGGAACAACCCTTCTTCTCACCATCCTCCTCCTCATCCCTTCCCATGACCAGAACACAGTGTAAGGAAGAGATTCCCTCATCTTCATCGGAGGGTTACCTTCTCTCCCCTGAATCAGACCACAAGGATCCCATTCCTGATATGTTGTACAGTGATTTCTTTGAGCAGTTTGATTTTTGA 804 0.4776 MENLPSDRIKAVHELERGREFATQLRRLVLNSNGEGDGNGTTPSAQDLADKVVTSFSNTLLLLNLPSRDSQVQQYSSCLLPAKSDDSEDSCKSTSAFKERRGSYKRRRISQTSEIDSETLINDGHAWRKYGQKNIMNAAYPRNYFRCSHRFDQGCQATKQVQRIQEKPEQYRTTYYGDHTCNRNSLNNEIILDANHPSILISFENNLPTEQPFFSPSSSSSLPMTRTQCKEEIPSSSSEGYLLSPESDHKDPIPDMLYSDFFEQFDF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele39g0018 267 MobiDBLite consensus disorder prediction 214 243 - -
Lele39g0018 267 Pfam WRKY DNA -binding domain 122 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele39g0018 267 Gene3D WRKY domain 105 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele39g0018 267 SMART WRKY_cls 121 183 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele39g0018 267 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 201 IPR044810 GO:0003700
Lele39g0018 267 MobiDBLite consensus disorder prediction 214 249 - -
Lele39g0018 267 ProSiteProfiles WRKY domain profile. 116 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele39g0018 267 SUPERFAMILY WRKY DNA-binding domain 118 183 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele39g0018 Lele-ChrLele39 132475 133782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele39g0018 1 185 WRKY Transcription Factor Family AT3G56400 39.378 3.74e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele39g0018 WRKY 1.9e-23 CL0274